Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RFPL4AP5-201ENST00000514977 504 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC105031.1-201ENST00000518550 476 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC093765.1-201ENST00000603758 881 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC018714.1-201ENST00000605028 208 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC084782.3-201ENST00000612282 578 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC073530.2-201ENST00000623987 261 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC007494.3-201ENST00000624660 743 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHGDHO43175 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PHGDHO43175 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 AL672167.1-204ENST00000641875 3017 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 SCARNA15-201ENST00000607520 4325 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PHGDHO43175 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PHGDHO43175 RNU6-216P-201ENST00000363282 104 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 SNORD116-9-201ENST00000384000 95 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 SNORD116-3-201ENST00000384287 95 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 SNORD116-7-201ENST00000384404 95 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RNU6-1122P-201ENST00000384449 107 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 SNORD116-5-201ENST00000384462 95 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 MIR1182-201ENST00000408363 97 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 RNU2-28P-201ENST00000410457 189 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 CEACAMP8-201ENST00000413902 580 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.05□□□□□ -1.6
PHGDHO43175 SEPT2P1-201ENST00000419651 180 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC012519.1-201ENST00000424588 610 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC093655.2-201ENST00000425735 631 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RPL7L1P9-201ENST00000431298 745 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 BX323845.1-201ENST00000432417 179 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC023347.2-201ENST00000433994 462 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 ISCA1P2-201ENST00000438679 421 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PHGDHO43175 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 EIF4A1P11-201ENST00000451239 222 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RPL23AP35-201ENST00000451906 501 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 MTCO3P16-201ENST00000454456 754 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC092754.2-201ENST00000463506 460 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 MTND6P6-201ENST00000478031 263 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 KLRA1P-201ENST00000503499 986 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC117532.1-201ENST00000514638 323 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC090502.2-201ENST00000549267 280 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.05□□□□□ -1.6
PHGDHO43175 AC012435.1-202ENST00000568772 240 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 DPRXP4-201ENST00000578053 568 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.05□□□□□ -1.6
PHGDHO43175 AL590229.1-201ENST00000603497 542 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.05□□□□□ -1.6
PHGDHO43175 HSPE1P14-201ENST00000605812 302 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 RPSAP73-201ENST00000614820 330 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC092650.2-201ENST00000619984 902 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 AC098679.5-201ENST00000624394 571 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.05□□□□□ -1.6
PHGDHO43175 MIR4302-201ENST00000638058 60 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 NEAT1-202ENST00000501122 22743 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 AL031119.1-201ENST00000404707 1879 ntBASIC5.05□□□□□ -1.6
PHGDHO43175 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHGDHO43175 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.04□□□□□ -1.6
PHGDHO43175 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms