Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RGPD3A6NKT7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.71□□□□□ -1.65
RGPD3A6NKT7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RGPD3A6NKT7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RGPD3A6NKT7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 RPL7P28-201ENST00000437739 740 ntBASIC4.71□□□□□ -1.66
RGPD3A6NKT7 RNA5SP208-201ENST00000516156 78 ntBASIC4.71□□□□□ -1.66
RGPD3A6NKT7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RGPD3A6NKT7 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
RGPD3A6NKT7 SNORD17-201ENST00000390930 237 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL139095.1-201ENST00000404326 391 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 EIF4EP1-201ENST00000422311 642 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 REREP1Y-201ENST00000422655 198 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 REREP2Y-201ENST00000439103 200 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 NCAPGP2-201ENST00000557911 754 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 LARP7P3-201ENST00000579888 337 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL353600.1-201ENST00000608148 251 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL133383.2-201ENST00000622958 2336 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 ANKRD36P1-201ENST00000344424 659 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC004069.2-201ENST00000505438 1114 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC006023.1-201ENST00000603944 259 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL713922.2-201ENST00000619384 716 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AC233263.6-201ENST00000631132 1963 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AL121839.2-201ENST00000565058 6943 ntBASIC4.7□□□□□ -1.66
RGPD3A6NKT7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RGPD3A6NKT7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 BMS1P3-201ENST00000372011 932 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 RNU6-301P-201ENST00000384277 107 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 IGLV3-26-201ENST00000520756 302 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC008011.1-201ENST00000545989 227 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AL133247.2-201ENST00000603236 482 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC124312.4-201ENST00000605533 310 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC069209.1-201ENST00000619282 651 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 MAPK10-253ENST00000641010 4072 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 SRP72P2-201ENST00000344851 1979 ntBASIC4.69□□□□□ -1.66
RGPD3A6NKT7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RGPD3A6NKT7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RGPD3A6NKT7 UBE2V1P2-201ENST00000397758 440 ntBASIC4.68□□□□□ -1.66
RGPD3A6NKT7 VN1R8P-201ENST00000407739 893 ntBASIC4.68□□□□□ -1.66
RGPD3A6NKT7 RN7SKP111-201ENST00000410349 271 ntBASIC4.68□□□□□ -1.66
RGPD3A6NKT7 OSTCP5-201ENST00000425293 453 ntBASIC4.68□□□□□ -1.66
RGPD3A6NKT7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.68□□□□□ -1.66
RGPD3A6NKT7 RPL27AP5-201ENST00000469428 449 ntBASIC4.68□□□□□ -1.66
RGPD3A6NKT7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms