Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC022832.1-201ENST00000530718 645 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 OR7K1P-201ENST00000546439 926 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC090502.2-201ENST00000549267 280 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LSM6P2-201ENST00000552208 177 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC012435.1-202ENST00000568772 240 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC083899.3-201ENST00000603413 594 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AL359535.1-201ENST00000612100 1087 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC025574.2-201ENST00000615621 514 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC098679.5-201ENST00000624394 571 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 OR52B5P-202ENST00000641118 1110 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 PANDAR-201ENST00000629595 1506 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RNA5SP335-201ENST00000363817 110 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 CYCSP45-201ENST00000402289 315 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL589647.1-201ENST00000402485 466 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 BTF3L4P1-201ENST00000413813 468 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC005033.1-201ENST00000428904 813 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 MEMO1P4-201ENST00000453590 386 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 MTCO3P2-201ENST00000457365 171 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SKP99-201ENST00000517028 307 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 OR8G3P-201ENST00000533406 921 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092851.1-201ENST00000535964 478 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RFPL1S-203ENST00000539579 330 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 EIF5A2P1-201ENST00000564027 460 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC107982.3-201ENST00000584957 985 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC020914.6-201ENST00000594327 272 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068790.2-201ENST00000602601 557 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AL596327.1-201ENST00000603629 213 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AP001521.1-201ENST00000609150 300 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC231657.1-201ENST00000624313 397 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092184.1-201ENST00000625042 715 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF833P-201ENST00000424938 1494 ntBASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA3Q9Y5H0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 DDX43P2-201ENST00000604753 1354 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 OR55B1P-203ENST00000641518 2602 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms