Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC112198.1-201ENST00000505369 1220 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC093281.2-201ENST00000510153 597 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL117351.2-201ENST00000513571 157 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-347P-201ENST00000516658 105 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC017100.2-201ENST00000584628 355 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL162431.4-201ENST00000604674 411 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL354760.1-201ENST00000608357 643 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC013562.2-201ENST00000611632 603 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 OR2L1P-202ENST00000641567 1023 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC026523.2-201ENST00000625039 7739 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL022322.2-201ENST00000624072 20397 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 MUC2-202ENST00000613187 4845 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 Y_RNA.25-201ENST00000362528 102 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RNU1-146P-201ENST00000364015 165 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 MIR105-1-201ENST00000385222 81 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 NPM1P40-201ENST00000412758 733 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RPL26P29-201ENST00000415623 438 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL360221.1-201ENST00000445989 335 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC243772.1-201ENST00000451620 410 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 NDUFA5P7-201ENST00000452914 242 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 MTCO3P16-201ENST00000454456 754 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RPS4XP12-201ENST00000461747 709 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RN7SL814P-201ENST00000487715 300 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RPL7P38-201ENST00000488396 739 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 KLRA1P-201ENST00000503499 986 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RPS27AP18-201ENST00000515536 459 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC027309.2-201ENST00000520566 192 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 SMARCE1P4-201ENST00000523647 241 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AP005262.1-201ENST00000582646 997 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AC091932.2-201ENST00000623014 291 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 AL049536.1-201ENST00000625043 744 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 PCMTD1P7-201ENST00000634506 357 ntBASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB1Q9Y5F3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms