Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF6Q9Y252 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF6Q9Y252 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF6Q9Y252 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RNF6Q9Y252 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF6Q9Y252 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF6Q9Y252 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC006042.3-201ENST00000454684 1469 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 RNA5SP513-201ENST00000364648 118 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 MIR708-201ENST00000390708 88 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 SNORA57.1-201ENST00000391227 145 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 RN7SKP27-201ENST00000410684 333 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL357078.2-201ENST00000416486 427 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC01347-201ENST00000417964 355 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL138785.1-201ENST00000425821 331 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 IPMKP1-201ENST00000425988 855 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 RPL23AP93-201ENST00000440847 484 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC069540.1-201ENST00000446320 988 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 VN1R32P-201ENST00000452234 905 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 RPL23AP2-201ENST00000471227 466 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 RPS26P15-201ENST00000488067 348 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC093824.1-201ENST00000508796 343 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC010285.3-201ENST00000511668 676 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 MTCO1P35-201ENST00000515270 228 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 SNORA31.9-201ENST00000516429 84 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 IGKV2-36-201ENST00000519999 223 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 OR8G5-201ENST00000524943 1041 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 PHBP17-201ENST00000528576 541 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 HMGB3P26-201ENST00000560051 582 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 MIR4716-201ENST00000579628 84 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AL356121.2-201ENST00000624715 780 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AP000843.1-201ENST00000624880 701 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 FRG1DP-201ENST00000635586 771 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF6Q9Y252 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RNF6Q9Y252 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF6Q9Y252 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF6Q9Y252 LINC00622-201ENST00000562811 1570 ntBASIC4.06□□□□□ -1.76
RNF6Q9Y252 AC006971.1-201ENST00000407916 4486 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC125257.1-201ENST00000560400 2930 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 MTND4P31-201ENST00000425607 1343 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC012020.1-201ENST00000624541 1728 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 CPHL1P-201ENST00000461341 3407 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 SNORA70C-201ENST00000384538 135 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 SDHCP2-201ENST00000398565 501 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC011933.1-201ENST00000413334 321 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 TMSB10P2-201ENST00000416049 131 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 MORF4L1P7-201ENST00000426038 703 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 EEF1A1P1-201ENST00000447052 739 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 ABCF2P2-201ENST00000450549 296 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 IFNWP4-201ENST00000453148 294 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 MTND2P30-201ENST00000456663 382 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 RPL7P32-201ENST00000457119 744 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC116533.1-201ENST00000459748 321 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC010683.1-201ENST00000473673 378 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 VWA8P1-201ENST00000510889 176 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC010476.1-201ENST00000519111 851 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AP000827.1-201ENST00000527814 258 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 PDCD5P1-201ENST00000543528 309 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC084824.1-201ENST00000550917 1005 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms