Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL355810.1-201ENST00000614629 552 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
PDZRN3Q9UPQ7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
PDZRN3Q9UPQ7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
PDZRN3Q9UPQ7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.117-201ENST00000363294 101 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-359P-201ENST00000365466 108 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AL162578.1-201ENST00000406202 378 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 RPS21P8-201ENST00000413365 247 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 RPL7P10-201ENST00000417407 739 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 BX510359.3-201ENST00000422168 306 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AL606753.1-201ENST00000427435 87 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AL359672.1-201ENST00000442302 409 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 MORF4-201ENST00000447135 971 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AP006222.1-205ENST00000450734 457 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 MEMO1P4-201ENST00000453590 386 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 RPL5P12-201ENST00000477071 851 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC010493.1-201ENST00000513479 292 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 RN7SKP256-201ENST00000517201 314 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC087241.2-201ENST00000535801 324 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC067931.1-201ENST00000624190 671 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 AC092724.1-201ENST00000624623 3397 ntBASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.83□□□□□ -1.16
PDZRN3Q9UPQ7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-74P-201ENST00000384235 107 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 SNORA70.9-201ENST00000384370 135 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.481-201ENST00000384373 102 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.489-201ENST00000384410 101 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 TRAV35-201ENST00000390462 330 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 MIR1203-201ENST00000408812 85 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC127526.2-201ENST00000426436 775 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 PPIAP10-201ENST00000438675 458 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 RABEPKP1-201ENST00000440529 1026 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC079922.1-201ENST00000443291 359 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC135999.1-201ENST00000478962 479 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 RNA5SP434-201ENST00000516647 121 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 COPS8P3-201ENST00000526024 482 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC090651.1-201ENST00000567865 634 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC090510.2-201ENST00000617465 629 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC231657.1-201ENST00000624313 397 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC087821.2-201ENST00000637086 450 ntBASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PDZRN3Q9UPQ7 AC007114.2-201ENST00000576014 4281 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms