Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-146P-201ENST00000384602 108 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 RPL21P65-201ENST00000406094 466 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 MIR1179-201ENST00000408703 91 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 RNA5SP306-201ENST00000411087 107 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 JKAMPP1-201ENST00000413804 919 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 RPS6P12-201ENST00000432491 726 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 KCTD10P1-201ENST00000434203 625 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC006011.1-201ENST00000442758 349 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 RSL24D1P2-201ENST00000445584 366 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 S100A11P1-201ENST00000477525 312 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC017037.1-201ENST00000508460 471 ntBASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP2Q9UDT6 AC116667.1-201ENST00000604855 2072 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 RN7SKP280-201ENST00000364196 304 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 RPL21P89-201ENST00000444021 467 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 RN7SL585P-201ENST00000470538 280 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 RPS26P15-201ENST00000488067 348 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC025554.1-201ENST00000505641 188 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC018797.3-201ENST00000513388 1241 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC009032.1-201ENST00000617574 431 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 MIR4727-201ENST00000622232 55 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP2Q9UDT6 Z82217.1-201ENST00000625157 8149 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC025750.1-201ENST00000399891 379 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TPT1P2-201ENST00000413105 503 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 RAC1P3-201ENST00000416129 580 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AL445528.1-201ENST00000426330 420 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 YWHAEP5-201ENST00000431545 765 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AL606490.7-201ENST00000433136 191 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC122718.1-201ENST00000439448 744 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 MTCYBP21-201ENST00000443300 1113 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 FAM133DP-201ENST00000464802 691 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC068020.1-201ENST00000594215 661 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms