Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 MTND2P25-201ENST00000449028 610 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RPL5P32-201ENST00000454085 879 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 C1DP3-201ENST00000455013 423 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RPL31P53-201ENST00000457065 348 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RNA5SP179-201ENST00000517284 121 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ADAM3B-201ENST00000569937 840 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 FAM60CP-201ENST00000591086 664 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 VN1R79P-201ENST00000593540 513 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL390816.3-201ENST00000604527 1066 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL591034.3-201ENST00000605511 685 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC138473.1-201ENST00000605717 526 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RNU4-89P-201ENST00000607443 133 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC117490.2-201ENST00000610042 594 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 MIR6830-201ENST00000636015 70 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC017002.4-201ENST00000604721 1525 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RLIMP1-201ENST00000339626 1680 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL121657.1-201ENST00000327215 531 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RNU6-386P-201ENST00000362650 107 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 U3.15-201ENST00000365398 212 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 MIR199A2-201ENST00000385289 110 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 MT-TP-201ENST00000387461 68 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RNU4-6P-201ENST00000410804 122 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC009965.2-201ENST00000425328 970 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL691449.1-201ENST00000426570 421 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC093716.1-201ENST00000435923 377 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AF228730.2-201ENST00000438784 848 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RANP8-201ENST00000444720 713 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL500522.2-201ENST00000448562 343 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 CALM1P2-201ENST00000452941 448 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RPL23AP2-201ENST00000471227 466 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC011037.1-201ENST00000483964 558 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 FTH1P9-201ENST00000513251 355 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 MIR6758-201ENST00000620653 63 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL118496.1-201ENST00000440201 1812 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.92□□□□□ -1.78
TREX1Q9NSU2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TREX1Q9NSU2 AL139811.1-201ENST00000424779 2299 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 SNORA70C-201ENST00000384538 135 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RPS26P8-201ENST00000393490 348 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RPL31P52-201ENST00000407532 367 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RNA5SP317-201ENST00000410176 116 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RNA5SP311-201ENST00000411290 116 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RAC1P3-201ENST00000416129 580 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC009220.1-201ENST00000451614 275 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RPS23P7-201ENST00000466210 444 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 LARP7P4-201ENST00000481075 878 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RNA5SP315-201ENST00000516340 116 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RNA5SP312-201ENST00000517068 116 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 IGHV3-32-201ENST00000519182 355 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms