Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 AC018809.2-201ENST00000602436 3823 ntBASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 AC112255.1-201ENST00000624070 2493 ntBASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.14□□□□□ -1.59
SEC61A2Q9H9S3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC083843.2-201ENST00000568248 6253 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MTCO1P14-201ENST00000441695 1559 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC010266.2-201ENST00000564741 3255 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MFSD8-239ENST00000641590 2479 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC090220.1-201ENST00000593078 1699 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.97-201ENST00000363094 102 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 ARL4AP5-201ENST00000404372 599 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 GSTA9P-201ENST00000406231 611 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL034374.1-201ENST00000406329 351 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 BX295541.1-201ENST00000417774 250 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 RPL21P111-201ENST00000418453 477 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC062016.2-201ENST00000420950 676 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL358934.1-201ENST00000432346 324 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MTCYBP45-201ENST00000435243 565 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 RPL7P59-201ENST00000447700 943 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 SNRPFP4-201ENST00000456366 242 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL122020.1-201ENST00000472287 459 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 HMGN1P12-201ENST00000499125 195 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC098799.3-201ENST00000506095 438 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC105914.1-201ENST00000511798 226 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP135-201ENST00000517019 125 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MTCO2P4-201ENST00000517968 247 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MTND1P35-201ENST00000526739 508 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC103710.1-201ENST00000610003 901 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AP001506.1-201ENST00000615444 211 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC009159.1-201ENST00000618386 642 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL445264.1-201ENST00000621719 171 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 GDI2P1-201ENST00000429312 1336 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AC004076.2-201ENST00000620532 3323 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 MAPK10-338ENST00000641647 3362 ntBASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SEC61A2Q9H9S3 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 OR52B3P-201ENST00000314715 928 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.89-201ENST00000363031 102 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RNU6-492P-201ENST00000363035 104 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SNORA62.2-201ENST00000364672 152 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RNU4-7P-201ENST00000364758 141 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RNU6-534P-201ENST00000364877 106 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.409-201ENST00000383990 98 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.509-201ENST00000384506 99 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.573-201ENST00000384763 105 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MT-TD-201ENST00000387419 68 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms