Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 FCF1P6-201ENST00000456841 595 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RPL32P14-201ENST00000463196 378 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC004815.1-201ENST00000484185 331 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RPL23AP72-201ENST00000492447 435 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC121161.1-201ENST00000510606 652 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 IGKV2-38-201ENST00000517443 247 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC109635.6-201ENST00000525487 1113 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC007599.1-201ENST00000568688 1174 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC025175.1-201ENST00000606482 759 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC097504.2-201ENST00000608088 454 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL445528.2-201ENST00000620582 470 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 PRO1804-201ENST00000623780 2050 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC008033.1-201ENST00000216407 1162 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 MIR16-2-201ENST00000362117 81 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-252P-201ENST00000363232 107 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-1257P-201ENST00000384625 110 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-925P-201ENST00000384629 104 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RNA5SP332-201ENST00000391063 115 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 HMGN2P8-201ENST00000391458 268 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RNU2-17P-201ENST00000410290 190 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RPL30P2-201ENST00000414021 291 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 MTCO1P54-201ENST00000430139 712 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 MRPL50P1-201ENST00000431951 384 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC091685.2-201ENST00000454924 864 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 RPL23AP81-201ENST00000455252 467 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC092324.1-201ENST00000468671 324 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC010374.1-201ENST00000503762 1237 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC112518.2-201ENST00000508565 425 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC005084.1-201ENST00000605160 304 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC034236.3-201ENST00000605999 461 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC008759.3-201ENST00000613300 508 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AL391261.4-201ENST00000616012 481 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC000123.2-201ENST00000623124 461 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC090772.4-201ENST00000623599 362 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AP005264.7-201ENST00000625003 745 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC009229.4-201ENST00000623854 1947 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 AC092162.3-201ENST00000624511 1624 ntBASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC28BQ9BUN5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 MTND5P11-201ENST00000511037 1812 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms