Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC110743.1-201ENST00000584870 478 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 AL513327.3-201ENST00000602618 469 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 AC104785.1-201ENST00000603220 588 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 AC239868.4-201ENST00000608318 671 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 AL359535.1-201ENST00000612100 1087 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 AC109309.2-201ENST00000612597 332 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 RN7SL544P-201ENST00000617232 284 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 RN7SL763P-201ENST00000620922 284 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK1Q99986 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK1Q99986 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK1Q99986 AL691477.1-201ENST00000624398 162 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.97□□□□□ -1.61
VRK1Q99986 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VRK1Q99986 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VRK1Q99986 AC004817.4-201ENST00000602396 3625 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK1Q99986 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 AC021242.1-201ENST00000507315 2035 ntBASIC4.97□□□□□ -1.61
VRK1Q99986 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK1Q99986 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.96□□□□□ -1.61
VRK1Q99986 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VRK1Q99986 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VRK1Q99986 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.96□□□□□ -1.61
VRK1Q99986 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VRK1Q99986 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 MTND4P4-201ENST00000439033 1366 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VRK1Q99986 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VRK1Q99986 RNA5SP394-201ENST00000364216 119 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VRK1Q99986 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC211486.3-201ENST00000412694 621 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 UBTFL3-201ENST00000418934 1024 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 AL365184.2-201ENST00000431139 435 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 SUMO2P3-201ENST00000438311 288 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 COX6CP12-201ENST00000446748 202 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 IGBP1P3-201ENST00000447449 1000 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 EPS15P1-201ENST00000448836 336 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC239809.1-201ENST00000450470 217 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK1Q99986 CBX1P2-201ENST00000453841 458 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC092757.1-201ENST00000467293 467 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 OR52A4P-201ENST00000472867 958 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 UBTFL6-201ENST00000477929 1024 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 RN7SL214P-201ENST00000487317 265 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 FTH1P24-201ENST00000503502 462 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 SNORA43.3-201ENST00000517240 103 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 IGLV3-30-201ENST00000524362 298 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC022880.1-201ENST00000534017 973 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC126615.2-201ENST00000553003 515 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 MIR4637-201ENST00000582405 84 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 MIR4660-201ENST00000583549 74 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 AL136363.2-201ENST00000604173 851 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC004492.1-201ENST00000607036 742 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC078899.5-201ENST00000612475 178 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC010678.1-201ENST00000614118 713 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 AC006338.2-201ENST00000616864 791 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK1Q99986 AL356596.1-201ENST00000624230 379 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 MUC2-202ENST00000613187 4845 ntBASIC4.96□□□□□ -1.62
VRK1Q99986 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms