Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AP002505.2-201ENST00000623585 696 ntBASIC6.44□□□□□ -1.38
SYNGAP1Q96PV0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNGAP1Q96PV0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNGAP1Q96PV0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 BX284613.1-201ENST00000452221 1641 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC007938.2-201ENST00000604666 2634 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MFSD8-239ENST00000641590 2479 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RNY4P14-201ENST00000363656 96 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 Y_RNA.356-201ENST00000365475 113 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MIR16-1-201ENST00000385271 89 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MT-TP-201ENST00000387461 68 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MTCO3P40-201ENST00000392516 676 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC025750.1-201ENST00000399891 379 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RN7SKP27-201ENST00000410684 333 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RPL35AP24-201ENST00000413846 330 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 HMGB1P11-201ENST00000413899 637 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC114814.2-201ENST00000419195 485 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC073464.1-201ENST00000429823 534 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC006335.2-201ENST00000437993 330 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AL450263.2-201ENST00000439400 589 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MTND5P14-201ENST00000441481 1267 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC021205.1-201ENST00000468797 348 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 TRBV8-2-201ENST00000475637 270 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RPS21P4-201ENST00000487122 248 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC008953.1-201ENST00000497334 318 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC097173.1-201ENST00000505862 819 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 RNU6-1004P-201ENST00000516584 111 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC012616.1-201ENST00000600294 197 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AL590282.1-201ENST00000610379 1136 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC131902.3-201ENST00000611767 581 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AL592295.2-201ENST00000612578 206 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC011472.4-201ENST00000615848 491 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC090510.2-201ENST00000617465 629 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 FER-210ENST00000628534 558 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 OR5BR1P-201ENST00000524992 1330 ntBASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNGAP1Q96PV0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 RPL7L1P9-201ENST00000431298 745 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 RPS3AP38-201ENST00000435889 763 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LDHAP2-201ENST00000437325 985 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL451074.3-201ENST00000437709 472 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 KRT8P51-201ENST00000438938 274 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SNRPFP4-201ENST00000456366 242 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 PSMC1P13-201ENST00000458195 985 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC091180.1-201ENST00000462104 372 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TRBV5-2-201ENST00000489095 273 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC091133.4-201ENST00000511142 308 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC024589.1-201ENST00000512207 263 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms