Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6-603P-201ENST00000411403 107 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 ATP5HP2-201ENST00000433885 485 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 RPL12P46-201ENST00000436610 195 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC239367.2-201ENST00000447309 705 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC239809.1-201ENST00000450470 217 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 RPL7AP52-201ENST00000458096 790 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 RNA5SP246-201ENST00000458909 119 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 RNU6-1218P-201ENST00000458990 108 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC010627.1-201ENST00000503819 1294 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 RNU6-491P-201ENST00000516099 110 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 MRPL49P2-201ENST00000521066 465 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC007599.1-201ENST00000568688 1174 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 RPL23AP87-202ENST00000573039 466 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC006116.5-201ENST00000591936 559 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC083809.1-201ENST00000615051 472 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 AC090246.1-201ENST00000616499 426 ntBASIC3.84□□□□□ -1.79
COL21A1Q96P44 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL21A1Q96P44 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.79
COL21A1Q96P44 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL21A1Q96P44 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.8
COL21A1Q96P44 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL21A1Q96P44 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 MIR320B1-201ENST00000390209 79 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 RPL26P37-201ENST00000411983 438 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC093698.1-201ENST00000423843 571 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 COX6CP15-201ENST00000426313 211 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 RPS20P1-201ENST00000434853 354 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 PPIAP21-201ENST00000464473 501 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC067904.2-201ENST00000517322 1283 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC018552.3-201ENST00000567416 561 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC079171.1-201ENST00000568788 914 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 BNIP3P22-201ENST00000593399 556 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC007423.1-201ENST00000605009 627 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AC023043.4-201ENST00000612081 449 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL773545.4-201ENST00000637262 310 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 AL513478.4-201ENST00000641636 310 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
COL21A1Q96P44 ERCC6-202ENST00000374127 1782 ntBASIC3.83□□□□□ -1.8
COL21A1Q96P44 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL21A1Q96P44 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC134882.1-201ENST00000603738 1676 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 RNU6-666P-201ENST00000363499 107 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 RPS27AP11-201ENST00000402798 447 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AL512504.1-201ENST00000415494 778 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 MTCO1P54-201ENST00000430139 712 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 PPIAP17-201ENST00000438507 471 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 Z99127.2-201ENST00000441426 334 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AL627224.1-201ENST00000448334 444 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 APOOP2-201ENST00000461561 539 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 RPL31P61-201ENST00000496160 376 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms