Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RPL38P1-201ENST00000460914 211 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 PFN1P6-201ENST00000476786 399 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC112204.1-201ENST00000502591 103 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 MTND3P22-201ENST00000510932 243 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC010493.1-201ENST00000513479 292 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 Y_RNA.704-201ENST00000516851 102 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AP003467.2-201ENST00000520175 319 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 ARL2BPP5-201ENST00000523141 481 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 MTND1P35-201ENST00000526739 508 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 VN1R84P-201ENST00000593697 235 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 BNIP3P11-201ENST00000603878 563 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC007363.1-201ENST00000604736 620 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC018695.5-201ENST00000605872 315 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AP003122.6-201ENST00000623831 495 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 PISRT1-201ENST00000626175 531 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 AC004656.1-201ENST00000568479 4951 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.56□□□□□ -1.52
PTCHD1Q96NR3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 OR11H4-201ENST00000315409 1082 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 Y_RNA.160-201ENST00000363677 92 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RNU1-59P-201ENST00000364829 162 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RPS3AP9-201ENST00000417027 792 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC234782.4-201ENST00000417646 1048 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RPS3P2-201ENST00000421346 701 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC079807.1-201ENST00000429993 481 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC126120.1-201ENST00000431082 470 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AL663074.2-201ENST00000440621 479 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RPS23P9-201ENST00000448848 438 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC099563.1-201ENST00000456086 418 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RPS15AP1-201ENST00000457423 391 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RNF138P1-201ENST00000502765 546 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC022447.3-201ENST00000506865 495 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 RNU6-202P-201ENST00000515998 96 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AL121594.2-201ENST00000541658 472 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC145423.1-201ENST00000605712 336 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AL451049.1-201ENST00000608672 497 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 U1.25-201ENST00000614085 162 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AL139099.4-201ENST00000614802 114 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 AC069234.4-201ENST00000621276 412 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 MIR1321-201ENST00000637766 79 ntBASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PTCHD1Q96NR3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms