Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC092079.1-201ENST00000558620 1985 ntBASIC4.09□□□□□ -1.76
CCDC42Q96M95 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC42Q96M95 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 RNA5SP97-201ENST00000365006 84 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 CYP1D1P-201ENST00000416662 1433 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 RPS26P40-201ENST00000435209 294 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC42Q96M95 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC009263.1-201ENST00000441193 1239 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 CLIC4P1-201ENST00000453177 535 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 RPS23P7-201ENST00000466210 444 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AP000926.1-201ENST00000479573 241 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 SNORA70.14-201ENST00000516205 110 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC073429.2-201ENST00000569694 1444 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC053481.2-202ENST00000582394 1500 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC011477.5-201ENST00000586571 259 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 RNU4-89P-201ENST00000607443 133 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AL354760.1-201ENST00000608357 643 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AC006946.3-201ENST00000609791 756 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 MIR6730-201ENST00000622213 67 ntBASIC4.08□□□□□ -1.76
CCDC42Q96M95 AL592437.2-201ENST00000421655 2434 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 CASC19-284ENST00000642142 1868 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC42Q96M95 RPS4XP5-202ENST00000449995 1334 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 RNU1-87P-201ENST00000363727 170 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC42Q96M95 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 AL159169.1-201ENST00000421119 127 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 AC017083.1-201ENST00000428093 483 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 MOB1AP1-201ENST00000430903 535 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 Z74696.2-201ENST00000436514 498 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 RN7SL459P-201ENST00000481078 302 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 FAM106CP-201ENST00000582212 507 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC42Q96M95 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
CCDC42Q96M95 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC42Q96M95 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC42Q96M95 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC066616.2-201ENST00000559334 1481 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 OR8G2P-201ENST00000412796 908 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 FTH1P6-201ENST00000430768 320 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC073143.1-201ENST00000436316 395 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC006480.1-201ENST00000449887 378 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC021146.1-201ENST00000511202 716 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC006960.3-201ENST00000561845 705 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 MIR4330-201ENST00000579077 105 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 KLKP1-201ENST00000595979 403 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC123786.2-201ENST00000603459 275 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC116651.1-201ENST00000609724 556 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AL356274.1-201ENST00000617064 410 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC073342.3-201ENST00000624211 193 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC42Q96M95 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 RLIMP1-201ENST00000339626 1680 ntBASIC4.06□□□□□ -1.76
CCDC42Q96M95 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC42Q96M95 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC42Q96M95 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC42Q96M95 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC42Q96M95 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC42Q96M95 RNA5SP105-201ENST00000391123 113 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AMZ2P2-201ENST00000406819 1057 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 RPL26P29-201ENST00000415623 438 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC114814.2-201ENST00000419195 485 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms