Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL121834.1-202ENST00000404494 277 ntBASIC5.27□□□□□ -1.57
USP47Q96K76 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.27□□□□□ -1.57
USP47Q96K76 PDSS1P2-201ENST00000449397 678 ntBASIC5.27□□□□□ -1.57
USP47Q96K76 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.27□□□□□ -1.57
USP47Q96K76 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.27□□□□□ -1.57
USP47Q96K76 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.27□□□□□ -1.57
USP47Q96K76 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.27□□□□□ -1.57
USP47Q96K76 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.27□□□□□ -1.57
USP47Q96K76 AL160281.1-201ENST00000605307 311 ntBASIC5.27□□□□□ -1.57
USP47Q96K76 AC015967.1-201ENST00000619893 476 ntBASIC5.27□□□□□ -1.57
USP47Q96K76 AC091905.1-201ENST00000624400 311 ntBASIC5.27□□□□□ -1.57
USP47Q96K76 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP47Q96K76 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.26□□□□□ -1.57
USP47Q96K76 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP47Q96K76 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
USP47Q96K76 AC093535.2-201ENST00000624769 2326 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.26□□□□□ -1.57
USP47Q96K76 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.26□□□□□ -1.57
USP47Q96K76 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AF228730.2-201ENST00000438784 848 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AL356535.1-201ENST00000440335 398 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AC092809.1-201ENST00000441469 474 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.26□□□□□ -1.57
USP47Q96K76 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.26□□□□□ -1.57
USP47Q96K76 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.26□□□□□ -1.57
USP47Q96K76 AC005972.3-201ENST00000606304 481 ntBASIC5.26□□□□□ -1.57
USP47Q96K76 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.26□□□□□ -1.57
USP47Q96K76 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP47Q96K76 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP47Q96K76 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.26□□□□□ -1.57
USP47Q96K76 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
USP47Q96K76 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
USP47Q96K76 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP47Q96K76 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.25□□□□□ -1.57
USP47Q96K76 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
USP47Q96K76 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
USP47Q96K76 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP47Q96K76 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 SNORD3H-201ENST00000384486 214 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 RNA5SP424-201ENST00000390988 115 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AC013268.2-201ENST00000420753 337 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.25□□□□□ -1.57
USP47Q96K76 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.25□□□□□ -1.57
USP47Q96K76 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.25□□□□□ -1.57
USP47Q96K76 AC098824.1-201ENST00000453565 980 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.25□□□□□ -1.57
USP47Q96K76 BTF3L4P4-201ENST00000506381 449 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.25□□□□□ -1.57
USP47Q96K76 AC008011.1-201ENST00000545989 227 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.25□□□□□ -1.57
USP47Q96K76 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.25□□□□□ -1.57
USP47Q96K76 AC233280.2-201ENST00000603917 1070 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.25□□□□□ -1.57
USP47Q96K76 AL159169.3-201ENST00000608871 561 ntBASIC5.25□□□□□ -1.57
USP47Q96K76 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP47Q96K76 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.25□□□□□ -1.57
USP47Q96K76 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP47Q96K76 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP47Q96K76 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP47Q96K76 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP47Q96K76 AC032011.1-201ENST00000611703 1549 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP47Q96K76 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP47Q96K76 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP47Q96K76 MIR34B-201ENST00000385076 84 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC233289.1-201ENST00000403700 508 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC004552.1-201ENST00000419089 348 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 YWHAEP5-201ENST00000431545 765 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 CYCSP43-201ENST00000438233 310 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 RPS26P3-201ENST00000470205 348 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC090543.2-201ENST00000483963 348 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC004057.1-201ENST00000485827 348 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 KATNBL1P4-201ENST00000503545 918 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC010342.1-201ENST00000514047 877 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 SUMO2P20-201ENST00000520803 283 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.24□□□□□ -1.57
USP47Q96K76 MIR3200-201ENST00000580767 85 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 AP000553.6-201ENST00000641242 118 ntBASIC5.24□□□□□ -1.57
USP47Q96K76 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.24□□□□□ -1.57
USP47Q96K76 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP47Q96K76 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP47Q96K76 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP47Q96K76 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP47Q96K76 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
USP47Q96K76 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 RPL21P17-201ENST00000397467 475 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 SNORA11.2-201ENST00000408318 127 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 SMC4P1-201ENST00000414479 527 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 USP12PY-201ENST00000427677 1064 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 HMGN2P31-201ENST00000432430 273 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.23□□□□□ -1.57
USP47Q96K76 NDUFB1P1-201ENST00000435191 180 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms