Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC007490.1-201ENST00000624321 703 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC025263.3-201ENST00000622965 1396 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 MAPK10-320ENST00000641462 6696 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RN7SKP95-201ENST00000362860 303 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 Y_RNA.192-201ENST00000363977 102 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AL356131.1-201ENST00000405826 414 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RPL31P52-201ENST00000407532 367 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RAP1BP1-201ENST00000412709 553 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 MTND4P22-201ENST00000413116 1169 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RPL7P53-201ENST00000421245 739 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 DYNLL1P7-201ENST00000429273 258 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 TXNL1P1-201ENST00000429528 554 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RPL7P11-201ENST00000437586 658 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RPL23AP76-201ENST00000441860 458 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC112498.1-201ENST00000444401 332 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 BTF3P6-201ENST00000448054 499 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC000111.2-201ENST00000448200 210 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC104306.1-201ENST00000449702 371 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 Z99714.1-201ENST00000450463 807 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 ANKRD26P4-201ENST00000455755 950 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 BET1P1-201ENST00000482276 359 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RN7SL214P-201ENST00000487317 265 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC008638.1-201ENST00000506035 866 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 OR5H4P-201ENST00000510851 923 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC010486.3-201ENST00000511602 785 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 CYCSP40-201ENST00000575927 294 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 Z94722.1-201ENST00000604328 474 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC100847.1-201ENST00000611316 481 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC018445.2-201ENST00000622987 260 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC119744.1-201ENST00000454746 1715 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AL353743.4-201ENST00000422653 1547 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 AC120338.1-201ENST00000625074 1541 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 DCAF13P3-201ENST00000561147 1334 ntBASIC5.48□□□□□ -1.53
CDK5RAP3Q96JB5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 A2MP1-204ENST00000566278 4130 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ASNSP1-201ENST00000518311 1939 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 RNA5SP123-201ENST00000363244 119 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC019155.1-201ENST00000382242 574 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 MIR105-2-201ENST00000385083 81 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC007435.1-201ENST00000421086 415 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC012512.1-201ENST00000446594 718 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 HMGB3P16-201ENST00000508037 287 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms