Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.36□□□□□ -1.23
LRCH3Q96II8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LRCH3Q96II8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRCH3Q96II8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 Y_RNA.22-201ENST00000362492 102 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 SNORA62.1-201ENST00000364287 154 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU6-343P-201ENST00000364709 104 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 Y_RNA.376-201ENST00000365638 108 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU6-39P-201ENST00000384344 107 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU6-1093P-201ENST00000391194 107 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AL391417.1-201ENST00000404100 426 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU2-29P-201ENST00000410423 189 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU6-272P-201ENST00000411028 104 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AL596448.1-201ENST00000415024 392 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 GJA6P-201ENST00000415117 1042 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 TMSB4XP3-201ENST00000445144 114 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 FTH1P25-201ENST00000447665 469 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 RPS23P9-201ENST00000448848 438 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AL118520.1-201ENST00000450770 291 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC112492.4-201ENST00000456549 352 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC011005.3-201ENST00000491624 395 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC114801.2-201ENST00000503825 781 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 RNU4-77P-201ENST00000516692 156 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC060775.1-201ENST00000518241 520 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC008562.1-201ENST00000521763 330 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 MTND4P7-201ENST00000523876 130 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 PMS2P3-207ENST00000529061 717 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC008083.2-201ENST00000546707 476 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 SETP7-201ENST00000552169 453 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC010547.6-201ENST00000571789 193 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 SNORD95-201ENST00000579879 68 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 RPSAP75-201ENST00000605848 301 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 AL355365.1-201ENST00000616480 294 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.35□□□□□ -1.23
LRCH3Q96II8 AC011755.1-201ENST00000623763 2049 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 LPAL2-203ENST00000454031 2498 ntBASIC7.35□□□□□ -1.23
LRCH3Q96II8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LRCH3Q96II8 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 AP003119.3-201ENST00000566747 4192 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 Y_RNA.29-201ENST00000362570 113 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 MIR1252-201ENST00000408861 65 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.34□□□□□ -1.23
LRCH3Q96II8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.34□□□□□ -1.23
LRCH3Q96II8 OR2AT2P-201ENST00000413438 905 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 AL451074.5-201ENST00000415894 435 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LRCH3Q96II8 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.34□□□□□ -1.23
LRCH3Q96II8 AC098831.1-201ENST00000440661 216 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 AC011816.1-201ENST00000441346 546 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 HMGB3P30-201ENST00000457863 606 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 RNU7-182P-201ENST00000459009 62 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 RN7SL379P-201ENST00000479912 293 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 AC011005.2-201ENST00000487324 359 ntBASIC7.34□□□□□ -1.23
LRCH3Q96II8 ATP5LP3-201ENST00000514223 304 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms