Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC106038.2-201ENST00000520706 568 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC006349.1-201ENST00000555526 235 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC093519.1-201ENST00000566109 298 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC012213.3-201ENST00000577199 777 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 VN1R92P-201ENST00000598511 928 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 WISP1-OT1-201ENST00000602893 642 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC008121.2-201ENST00000614647 523 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 PCMTD1P7-201ENST00000634506 357 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 MKKS-204ENST00000639674 192 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC01739-205ENST00000641890 573 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 KARSP3-201ENST00000571212 1504 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 RNA5SP507-201ENST00000363603 121 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 SNORA58B-201ENST00000364259 136 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 SNORA70-201ENST00000384436 135 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 RNU6-1151P-201ENST00000384684 107 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 GSTM3P2-201ENST00000412746 530 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 NPM1P11-201ENST00000417106 855 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 BOLA3P4-201ENST00000418151 400 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 OR6C64P-201ENST00000419708 825 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL138878.2-201ENST00000440581 1241 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 FHP1-201ENST00000442741 703 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL137845.2-201ENST00000444292 988 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC004980.3-201ENST00000447046 365 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 ENPP7P11-201ENST00000505915 627 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC008494.2-201ENST00000514544 370 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 RNU6-513P-201ENST00000516104 104 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AP000859.1-201ENST00000525536 307 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 HIGD1AP10-201ENST00000527837 282 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 HMGN2P6-201ENST00000551091 273 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 NDUFB4P11-201ENST00000560510 395 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC044860.2-201ENST00000561005 179 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC127024.5-201ENST00000580085 462 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AP005262.1-201ENST00000582646 997 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 MIR4443-201ENST00000585052 53 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC115085.1-201ENST00000588924 229 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC073544.2-201ENST00000601155 540 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL353600.1-201ENST00000608148 251 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC245297.2-201ENST00000610119 565 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC243654.2-201ENST00000612843 443 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC037198.3-201ENST00000616754 526 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms