Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS3Q969F9 MTCYBP34-201ENST00000439552 670 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 CEACAMP7-201ENST00000444105 496 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.45□□□□□ -1.54
HPS3Q969F9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.45□□□□□ -1.54
HPS3Q969F9 COX6CP18-201ENST00000448769 222 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC104689.1-201ENST00000473356 768 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 RPL7P18-201ENST00000478965 734 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 RN7SL319P-201ENST00000480656 221 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC090686.1-201ENST00000481577 749 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC011352.3-201ENST00000505162 593 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC079395.1-201ENST00000510981 262 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AP001189.2-201ENST00000527320 189 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 ELOCP32-201ENST00000548625 324 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 SERPINE4P-201ENST00000554978 281 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 AL109653.1-201ENST00000603091 248 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 Z94722.1-201ENST00000604328 474 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC116447.1-201ENST00000613153 453 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AL603755.1-201ENST00000619504 163 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC068870.2-201ENST00000620635 389 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC067852.7-201ENST00000623270 535 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS3Q969F9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 RN7SKP95-201ENST00000362860 303 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 RNA5SP123-201ENST00000363244 119 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AL161449.1-201ENST00000414531 1199 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC099336.2-201ENST00000422457 254 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 RPL7P11-201ENST00000437586 658 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 GTF3AP5-201ENST00000442645 697 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AC073850.1-201ENST00000449243 255 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AL591363.1-201ENST00000450091 483 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC099560.2-201ENST00000457554 255 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 RPL23AP56-201ENST00000460778 453 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 RPS4XP12-201ENST00000461747 709 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC109462.1-201ENST00000491087 368 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 NDUFA5P12-201ENST00000503796 343 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC008015.1-201ENST00000555505 465 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC109446.2-201ENST00000567872 497 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS3Q969F9 Z99497.2-201ENST00000603634 310 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC009163.6-201ENST00000612367 342 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AC069209.1-201ENST00000619282 651 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 AL512506.2-201ENST00000624472 458 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 MIR3974-201ENST00000637126 96 ntBASIC5.44□□□□□ -1.54
HPS3Q969F9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HPS3Q969F9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HPS3Q969F9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HPS3Q969F9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 RN7SKP104-201ENST00000362605 328 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms