Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC090017.1-201ENST00000548612 1779 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC073136.1-201ENST00000449426 2884 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL049545.1-201ENST00000401856 572 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL049693.1-201ENST00000402760 611 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RNU6-603P-201ENST00000411403 107 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 GTF2IP23-201ENST00000423746 351 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DPRXP1-201ENST00000426312 460 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 USP9YP22-201ENST00000438971 294 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC004865.1-201ENST00000442276 1003 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 MTATP6P26-201ENST00000445926 662 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 EXTL2P1-201ENST00000446218 416 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RPS27AP15-201ENST00000447672 466 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 COX6CP18-201ENST00000448769 222 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RPS5P7-201ENST00000456664 608 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 OR52A4P-201ENST00000472867 958 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC104971.1-201ENST00000495117 578 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC048346.1-201ENST00000510247 144 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC005351.1-201ENST00000511152 786 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 FABP5P12-201ENST00000515543 389 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RNU2-30P-201ENST00000516209 141 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RNA5SP135-201ENST00000517019 125 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 NBEAP1-201ENST00000554452 979 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC022884.2-201ENST00000578535 580 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL390816.3-201ENST00000604527 1066 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 MIR1322-201ENST00000638013 71 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 AC093591.2-201ENST00000565254 3843 ntBASIC4.89□□□□□ -1.63
HMGB4Q8WW32 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB4Q8WW32 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC005332.5-201ENST00000591222 2919 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 FAM133CP-201ENST00000332869 704 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 Y_RNA.192-201ENST00000363977 102 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 SNORA70.2-201ENST00000364506 135 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC068538.1-201ENST00000376856 336 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AL049697.2-201ENST00000403708 294 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 RPL7P44-201ENST00000424827 742 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 HMGN2P27-201ENST00000427352 270 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 RPS6P15-201ENST00000431996 751 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC073143.1-201ENST00000436316 395 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 RPL23AP76-201ENST00000441860 458 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 HMGB1P48-201ENST00000446155 598 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 MTND2P28-201ENST00000457540 1044 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AP000563.1-201ENST00000490865 758 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC109471.1-201ENST00000511631 612 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC008837.2-201ENST00000513076 418 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 SNORA3.4-201ENST00000515969 96 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AL049839.1-201ENST00000556151 657 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC009712.1-201ENST00000564938 316 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms