Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RPS26P2-201ENST00000440331 348 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RN7SL807P-201ENST00000470923 297 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 RPL5P16-201ENST00000471467 790 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 RN7SKP18-201ENST00000516005 275 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 CR383656.14-201ENST00000551951 406 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC005476.1-201ENST00000554427 397 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC007599.1-201ENST00000568688 1174 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RPL12P46-201ENST00000436610 195 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 SNORA70.18-201ENST00000516696 98 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC104662.1-201ENST00000604448 511 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 MARK2P15-201ENST00000432204 2186 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 HSPD1P14-201ENST00000432666 1618 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 HCFC2P1-201ENST00000392864 1592 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 MTCO1P46-201ENST00000451639 1491 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 SNORA68.2-201ENST00000391263 128 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 RPL21P13-201ENST00000488305 481 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
ALMS1Q8TCU4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 SEPT7P8-201ENST00000413308 775 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 DPY19L1P2-201ENST00000426647 915 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 RPS26P15-201ENST00000488067 348 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 CYCSP28-201ENST00000534284 321 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 ANKRD36P1-201ENST00000344424 659 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 NACA3P-201ENST00000359690 648 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 RNA5SP51-201ENST00000364750 119 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 Vault.1-201ENST00000516474 102 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 IGHV3-32-201ENST00000519182 355 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC100770.1-201ENST00000532310 322 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 MIR7154-201ENST00000620673 73 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC095038.2-201ENST00000621464 1070 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 FAM35DP-201ENST00000323387 2712 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 RNU1-108P-201ENST00000362556 161 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 RPL7P60-201ENST00000397636 735 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 GSTA8P-201ENST00000404253 637 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AL591419.1-201ENST00000427423 339 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC008065.1-201ENST00000428525 348 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC233982.1-201ENST00000451247 436 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC096576.1-201ENST00000489014 359 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC118465.1-201ENST00000513820 1271 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.56□□□□□ -2
ALMS1Q8TCU4 AC006504.3-201ENST00000586818 523 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms