Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC002456.2-201ENST00000509356 380 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC012417.1-201ENST00000582307 1039 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 LLPHP1-201ENST00000603571 367 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC114878.2-201ENST00000604863 1251 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AP000255.1-201ENST00000610276 676 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AP005264.7-201ENST00000625003 745 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.9□□□□□ -1.78
CLHC1Q8NHS4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 RNU4-39P-201ENST00000362455 127 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AL138799.3-201ENST00000438968 350 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 TMED11P-201ENST00000479478 690 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 RPL29P14-201ENST00000495837 428 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 TRAV31-201ENST00000502780 342 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 MTATP6P22-201ENST00000507369 598 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC108475.1-201ENST00000507880 950 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 MTCO1P30-201ENST00000515244 580 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 OR4A2P-201ENST00000527276 913 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 CR383656.6-201ENST00000550518 394 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC027281.1-201ENST00000574178 758 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC006270.2-201ENST00000578523 652 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC020914.4-201ENST00000597690 277 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC234771.5-201ENST00000600161 514 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC068790.4-201ENST00000602474 263 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC007687.1-201ENST00000602704 304 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC005191.1-201ENST00000603950 358 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC128687.2-201ENST00000609657 566 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC011944.2-201ENST00000624440 683 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AL627171.1-201ENST00000618845 1308 ntBASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLHC1Q8NHS4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 OR4K17-201ENST00000315543 1032 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RNA5SP509-201ENST00000364577 119 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RPL26P29-201ENST00000415623 438 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RPS27AP7-201ENST00000422792 455 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AL358472.1-201ENST00000431295 329 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RN7SL738P-201ENST00000470264 297 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RPL23AP71-201ENST00000470966 469 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RN7SL481P-201ENST00000477764 299 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 RPL21P103-201ENST00000479921 488 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC092451.1-201ENST00000480211 153 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 HPRT1P2-201ENST00000505250 544 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 PSMB7P1-201ENST00000556349 514 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AL109741.3-201ENST00000561748 592 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC115989.2-201ENST00000578640 563 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC244505.7-201ENST00000599675 272 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AP003117.1-201ENST00000602771 554 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms