Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC138393.1-206ENST00000540997 1886 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 OR11H4-201ENST00000315409 1082 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 MT-TP-201ENST00000387461 68 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 HMGB3P19-201ENST00000403971 560 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC016397.1-201ENST00000412463 242 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 HSPE1P12-201ENST00000412576 301 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 OR6K4P-201ENST00000423179 955 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC017083.1-201ENST00000428093 483 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 MRPL50P1-201ENST00000431951 384 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AF228730.2-201ENST00000438784 848 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AL356535.1-201ENST00000440335 398 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 FCF1P7-201ENST00000451185 558 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC092691.2-201ENST00000461787 803 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC006463.2-201ENST00000473326 348 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC012170.1-201ENST00000495139 359 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 HPRT1P2-201ENST00000505250 544 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 IGBP1P5-201ENST00000507524 1000 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC109458.1-201ENST00000508858 316 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 NARSP2-201ENST00000518524 679 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AP001180.3-201ENST00000582221 145 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 KPNA2P3-201ENST00000584190 848 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 AC128687.2-201ENST00000609657 566 ntBASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF439Q8NDP4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC126755.2-208ENST00000327792 462 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC138969.1-213ENST00000331436 462 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 ST13P16-201ENST00000401760 781 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC108032.1-201ENST00000416706 207 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 NPM1P24-201ENST00000428039 894 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AL356276.2-201ENST00000435919 558 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 VN1R25P-201ENST00000443385 738 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 NUTF2P3-201ENST00000448540 384 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 VN1R40P-201ENST00000455196 941 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC005229.2-201ENST00000456995 399 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 CEACAMP4-201ENST00000457676 421 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AP001086.1-201ENST00000494882 321 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC023575.1-201ENST00000580510 358 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC011477.5-201ENST00000586571 259 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 ARF4P1-201ENST00000605447 541 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AC103710.3-201ENST00000608157 948 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AL445423.1-201ENST00000609941 536 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AP000255.1-201ENST00000610276 676 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 AL589935.2-201ENST00000616471 1231 ntBASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF439Q8NDP4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms