Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC073055.1-201ENST00000456901 1621 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RN7SKP145-201ENST00000363291 303 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RNU6-560P-201ENST00000364007 108 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RNU6-1200P-201ENST00000384162 107 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RNA5SP187-201ENST00000384400 119 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 Y_RNA.560-201ENST00000384689 102 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 CBX1P3-201ENST00000413296 527 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 OR5AW1P-201ENST00000426334 1006 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL136231.1-201ENST00000429407 730 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 NRBF2P3-201ENST00000432731 865 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC093414.1-201ENST00000434712 514 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 Z74696.2-201ENST00000436514 498 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 MTATP6P13-201ENST00000438531 667 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL591503.2-201ENST00000442314 1005 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 GAPDHP14-201ENST00000450472 937 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RPL21P134-201ENST00000453468 483 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC068724.1-201ENST00000487100 792 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL024509.2-201ENST00000493462 493 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 IGBP1P4-201ENST00000503202 879 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC097173.1-201ENST00000505862 819 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 HSPE1P23-201ENST00000509838 286 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC108120.2-201ENST00000512973 294 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 HIGD1AP17-201ENST00000554576 276 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 MIR5708-201ENST00000579723 85 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 WISP1-OT1-201ENST00000602893 642 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC108738.1-201ENST00000603703 237 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC087241.4-201ENST00000612441 480 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AP004607.9-201ENST00000618202 316 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC011815.3-201ENST00000624194 473 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 MFSD8-245ENST00000641743 948 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC006484.1-201ENST00000435086 1884 ntBASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC068870.3-201ENST00000625077 2536 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MT-TH-201ENST00000387441 69 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL663109.1-201ENST00000411498 844 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MTCO2P34-201ENST00000421994 607 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL138787.1-202ENST00000437804 898 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC005154.2-201ENST00000438110 379 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 RPL23AP76-201ENST00000441860 458 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL035407.2-201ENST00000454090 378 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AURKAPS2-201ENST00000454983 333 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 RPS7P7-201ENST00000463499 571 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 RPL12P20-201ENST00000475538 479 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 CBX3P3-201ENST00000508108 532 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 OR5AK3P-201ENST00000527486 1297 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms