Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS8Q8N3P4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.67□□□□□ -1.5
VPS8Q8N3P4 RNA5SP322-201ENST00000363617 119 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 RNU6-283P-201ENST00000364788 107 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 CRYBB2P1-203ENST00000415709 538 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 RPL21P110-201ENST00000433345 446 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC010655.1-201ENST00000449336 292 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 PPIAP3-201ENST00000450588 505 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 NPM1P17-201ENST00000479221 602 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC007458.1-201ENST00000542812 373 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC024220.1-201ENST00000603675 484 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC096553.1-201ENST00000605169 829 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 U3.45-201ENST00000607547 219 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC069209.1-201ENST00000619282 651 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC087190.4-201ENST00000574616 8334 ntBASIC5.66□□□□□ -1.5
VPS8Q8N3P4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS8Q8N3P4 AC004552.1-201ENST00000419089 348 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AL159987.2-201ENST00000432754 307 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 RPS26P3-201ENST00000470205 348 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC090543.2-201ENST00000483963 348 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC004057.1-201ENST00000485827 348 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 RN7SKP83-201ENST00000516512 178 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 BRDTP1-201ENST00000605735 677 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC069200.1-201ENST00000609511 323 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC103858.2-201ENST00000621471 543 ntBASIC5.65□□□□□ -1.5
VPS8Q8N3P4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS8Q8N3P4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 SNORD46.1-201ENST00000364139 104 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 U3.39-201ENST00000408569 239 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 RPS29P4-201ENST00000414733 161 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 OSTCP5-201ENST00000425293 453 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 MTND2P25-201ENST00000449028 610 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AC007967.1-201ENST00000455422 1159 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 SYT14P1-201ENST00000481459 721 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 SNORA70.17-201ENST00000516449 133 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 AL356121.2-201ENST00000624715 780 ntBASIC5.65□□□□□ -1.51
VPS8Q8N3P4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS8Q8N3P4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 MFSD8-233ENST00000641482 4860 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC074029.4-201ENST00000624796 1859 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AL365440.1-201ENST00000436135 2167 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 NCAPGP1-201ENST00000505112 1814 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 OR6K3-202ENST00000368146 996 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AL672167.2-201ENST00000377164 879 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC007068.1-201ENST00000396690 844 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 HSPE1P8-201ENST00000406997 288 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 DPPA2P2-201ENST00000418220 897 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC068533.1-201ENST00000418542 415 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 REREP2Y-201ENST00000439103 200 ntBASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms