Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 EOGT-210ENST00000615922 1931 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SNORA31-201ENST00000362607 130 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RNU6-582P-201ENST00000362989 107 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SNORA70.10-201ENST00000384515 134 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RNU6-837P-201ENST00000391056 108 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC096533.1-201ENST00000411645 353 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL160275.2-201ENST00000412010 394 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC244098.2-201ENST00000422068 99 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 MTCYBP32-201ENST00000427945 1084 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 BX323845.1-201ENST00000432417 179 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RPL23AP16-201ENST00000441715 421 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SPRYD7P1-201ENST00000443861 570 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RPL31P15-201ENST00000449770 338 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 MRPL42P4-201ENST00000453267 443 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 YWHAEP1-201ENST00000453697 763 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL121877.1-201ENST00000453704 622 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC005008.1-201ENST00000456151 612 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 snoU13.3-201ENST00000459441 104 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RN7SL41P-201ENST00000476144 297 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RN7SL244P-201ENST00000493405 297 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 OR5H5P-201ENST00000503164 928 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC069306.1-201ENST00000507006 843 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 STMN1P2-201ENST00000508435 439 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 HPRT1P1-201ENST00000509498 657 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 IGHV3-32-201ENST00000519182 355 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AP000790.1-201ENST00000528891 737 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 NDUFS5P6-201ENST00000529136 295 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 MTND5P21-201ENST00000531961 522 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AP004242.1-201ENST00000533701 349 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 GSTP1P1-201ENST00000548078 319 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC005412.1-201ENST00000580812 1049 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC011447.4-201ENST00000587562 111 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 RPL26P30-202ENST00000602923 645 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 COX6CP4-201ENST00000605798 228 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC015982.1-201ENST00000608113 465 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL592148.2-201ENST00000612210 372 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL157770.1-201ENST00000623049 439 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 CR381572.2-201ENST00000624852 397 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP510-201ENST00000364697 99 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 MIR217-201ENST00000384817 110 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 MCTS2P-201ENST00000394552 546 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 RPL31P1-201ENST00000398116 372 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 OR7E156P-201ENST00000400303 464 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 LAP3P1-201ENST00000403648 294 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 AL023807.1-201ENST00000407932 359 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 RNU4-34P-201ENST00000410431 124 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 FABP7P1-201ENST00000424004 391 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 AC115283.1-201ENST00000427353 400 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 HMGN1P2-201ENST00000445197 310 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 RPL36AP39-201ENST00000445859 318 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 TCEA1P1-201ENST00000449716 880 ntBASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01561Q8N1V8 SYPL1P1-201ENST00000473622 768 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms