Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MRPL49P2-201ENST00000521066 465 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 CYCSP29-201ENST00000533731 318 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 TOMM20P2-201ENST00000540082 421 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 KPNA2P3-201ENST00000584190 848 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC068790.5-201ENST00000602741 355 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AL023583.1-201ENST00000607518 1143 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AL713922.2-201ENST00000619384 716 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC092017.2-201ENST00000427600 362 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 USP12PY-201ENST00000427677 1064 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 RPL7P28-201ENST00000437739 740 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 CACYBPP1-201ENST00000438592 684 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 RPL21P133-201ENST00000443666 476 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AL500522.2-201ENST00000448562 343 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 RPL23AP71-201ENST00000470966 469 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC108471.1-201ENST00000513977 287 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 MIR4697-201ENST00000582977 78 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC007620.3-201ENST00000608131 497 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC019131.2-201ENST00000609071 870 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 NF1P10-201ENST00000613227 742 ntBASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL3Q8IVW4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC017002.4-201ENST00000604721 1525 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 FABP12P1-201ENST00000401911 322 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 MIR1183-201ENST00000408856 89 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AL356276.2-201ENST00000435919 558 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 RANP8-201ENST00000444720 713 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 NDUFA5P9-201ENST00000472609 340 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC010683.1-201ENST00000473673 378 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AP000926.3-201ENST00000497201 299 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC138701.1-201ENST00000524329 714 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 MIR3939-201ENST00000582614 106 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 RNU4-89P-201ENST00000607443 133 ntBASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL3Q8IVW4 MIR486-1-201ENST00000612171 68 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms