Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL161729.3-201ENST00000603533 673 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC116447.1-201ENST00000613153 453 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC016911.1-201ENST00000613297 452 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AL591424.2-201ENST00000617023 128 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC073429.2-201ENST00000569694 1444 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 LINC00561-201ENST00000565815 2738 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 SPATA2P1-201ENST00000431223 2055 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 PRO1804-201ENST00000623780 2050 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 RNA5SP509-201ENST00000364577 119 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 RNU6-146P-201ENST00000384602 108 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MIR320B1-201ENST00000390209 79 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 RNU6-603P-201ENST00000411403 107 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AL159169.1-201ENST00000421119 127 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 RPL12P34-201ENST00000424532 479 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MTCO1P54-201ENST00000430139 712 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC068287.1-201ENST00000430283 295 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC021146.1-201ENST00000511202 716 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC093840.1-201ENST00000511599 336 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 PSMB7P1-201ENST00000556349 514 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MIR4277-201ENST00000578298 84 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MIR4330-201ENST00000579077 105 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 MIMT1-201ENST00000597105 1050 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC234771.5-201ENST00000600161 514 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC008745.1-201ENST00000604064 271 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC011944.2-201ENST00000624440 683 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AP000843.1-201ENST00000624880 701 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 AC119674.1-212ENST00000641155 993 ntBASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC50Q8IVM0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 OR4K17-201ENST00000315543 1032 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RNU4-39P-201ENST00000362455 127 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RNU6-225P-201ENST00000384613 103 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 HMGN2P8-201ENST00000391458 268 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL512504.1-201ENST00000415494 778 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RPS4XP4-201ENST00000443195 763 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL157827.1-201ENST00000447622 132 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RN7SL303P-201ENST00000469773 251 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RPL31P61-201ENST00000496160 376 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC025674.1-201ENST00000507074 324 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC108475.1-201ENST00000507880 950 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RNU6-1231P-201ENST00000517185 103 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC245128.3-201ENST00000594721 748 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC114878.2-201ENST00000604863 1251 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 ARF4P1-201ENST00000605447 541 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 BX322635.1-201ENST00000605804 496 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AL391261.4-201ENST00000616012 481 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC000123.2-201ENST00000623124 461 ntBASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC50Q8IVM0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms