Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 RN7SL254P-201ENST00000460609 284 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 PPP1R11P1-201ENST00000486095 376 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC034159.1-201ENST00000513885 583 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 HSD3BP3-201ENST00000514706 994 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 RNU6-327P-201ENST00000516270 127 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 RN7SKP35-201ENST00000517210 151 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC079075.1-201ENST00000559543 878 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC099489.2-201ENST00000574976 260 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC119403.2-201ENST00000590960 598 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 MIR132-201ENST00000591554 101 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC068768.2-201ENST00000602352 343 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AL352984.2-202ENST00000613699 155 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 U1.31-201ENST00000620022 160 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC024940.5-201ENST00000622889 474 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC009161.2-201ENST00000624626 138 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 RBMY1HP-201ENST00000382759 1389 ntBASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UBE3DQ7Z6J8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.77□□□□□ -1.48
UBE3DQ7Z6J8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL662795.2-201ENST00000624252 3706 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC005225.5-201ENST00000623547 2225 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RNU1-134P-201ENST00000362935 165 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-1120P-201ENST00000362988 108 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-289P-201ENST00000364093 107 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL121835.1-201ENST00000404250 354 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL359704.1-201ENST00000411586 781 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC127391.1-201ENST00000411737 98 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ELOCP4-201ENST00000420090 333 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC007394.1-201ENST00000421941 531 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 OR4F13P-201ENST00000428478 931 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPS26P40-201ENST00000435209 294 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPS3AP38-201ENST00000435889 763 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL353662.1-201ENST00000439099 327 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPS10P18-201ENST00000442662 495 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPL5P7-201ENST00000444235 813 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 FTLP8-201ENST00000446770 267 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPS15AP1-201ENST00000457423 391 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL445687.2-201ENST00000458156 728 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RN7SL352P-201ENST00000466002 277 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RPL7P19-201ENST00000469948 618 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC114728.1-201ENST00000488289 483 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC096576.1-201ENST00000489014 359 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 COX6CP8-201ENST00000522620 226 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL163952.1-202ENST00000569625 600 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 BNIP3P22-201ENST00000593399 556 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 BX664608.1-201ENST00000610519 487 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL136097.3-201ENST00000611097 505 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL365204.3-201ENST00000612448 685 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 AL133173.2-201ENST00000614270 90 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms