Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC009501.3-201ENST00000605001 1352 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL512283.1-201ENST00000606756 1384 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 Z82217.1-201ENST00000625157 8149 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MIR372-201ENST00000362225 67 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL356057.1-202ENST00000402263 756 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 GSTA12P-201ENST00000402398 508 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 BTF3P9-201ENST00000418784 283 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 RBMY1KP-201ENST00000423480 476 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MRPL50P1-201ENST00000431951 384 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL356276.2-201ENST00000435919 558 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MTND2P21-201ENST00000436242 1042 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AP000949.1-201ENST00000438328 629 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 IFNWP4-201ENST00000453148 294 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC090079.2-201ENST00000575289 768 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MIR3160-1-201ENST00000577972 85 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AL512506.1-201ENST00000613918 449 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC010608.2-201ENST00000624830 470 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 AC097504.1-201ENST00000515103 2415 ntBASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFWD3Q6PCD5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AL356967.1-201ENST00000406305 431 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 RANP4-201ENST00000413361 655 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 MTCYBP7-201ENST00000419540 1134 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 SEC63P1-201ENST00000425785 1258 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AL672167.3-201ENST00000465951 960 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 RPL23AP71-201ENST00000470966 469 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC093663.2-201ENST00000484625 313 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 RN7SL604P-201ENST00000492589 296 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 OR9N1P-202ENST00000494289 481 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 HMGB1P3-201ENST00000502802 616 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 BNIP3P41-201ENST00000503774 571 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC021087.2-201ENST00000504656 1203 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC093824.1-201ENST00000508796 343 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AP003049.1-201ENST00000529418 457 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC123786.2-201ENST00000603459 275 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC005014.3-201ENST00000605985 190 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC242628.1-201ENST00000606810 391 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AL136370.1-201ENST00000608166 691 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AL356274.1-201ENST00000617064 410 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AL359715.5-201ENST00000623431 443 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC112484.5-201ENST00000624189 228 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AP002371.2-201ENST00000624450 503 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 OR5AC4P-202ENST00000642086 985 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 AC114546.3-201ENST00000623582 1734 ntBASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFWD3Q6PCD5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms