Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 AC100871.1-201ENST00000507871 1456 ntBASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.89□□□□□ -1.79
H3F3CQ6NXT2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL136964.1-201ENST00000622038 2990 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 SPRR2C-201ENST00000290702 219 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 RNA5SP502-201ENST00000362694 119 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL355994.1-201ENST00000424379 260 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL356276.2-201ENST00000435919 558 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 RPL23AP46-201ENST00000438548 490 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AP000926.1-201ENST00000479573 241 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL132838.2-201ENST00000492041 314 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC108120.2-201ENST00000512973 294 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC008694.2-201ENST00000517591 306 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AL391597.1-201ENST00000618707 694 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 CR392039.4-201ENST00000624968 501 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 AC093311.1-201ENST00000506586 2021 ntBASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3CQ6NXT2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 RNA5SP388-201ENST00000362584 119 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 RNU4-23P-201ENST00000362839 140 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 MIR1179-201ENST00000408703 91 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 RNA5SP239-201ENST00000410218 129 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 TPMTP4-201ENST00000450749 678 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AC093824.1-201ENST00000508796 343 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AL020997.2-201ENST00000602607 184 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 RNU4-89P-201ENST00000607443 133 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 OR11H5P-202ENST00000641612 1325 ntBASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3CQ6NXT2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RN7SKP280-201ENST00000364196 304 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RNA5SP130-201ENST00000364431 114 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RNU6-317P-201ENST00000384031 107 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RN7SKP177-201ENST00000410567 355 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AC105402.1-201ENST00000413336 545 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RPS12P23-201ENST00000419579 400 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 YWHAEP5-201ENST00000431545 765 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 MTCYBP21-201ENST00000443300 1113 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 RPL21P89-201ENST00000444021 467 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 HMGB1P26-201ENST00000452520 628 ntBASIC3.86□□□□□ -1.79
H3F3CQ6NXT2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms