Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 RNA5SP366-201ENST00000365454 123 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AL356057.1-202ENST00000402263 756 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 Y_RNA.625-201ENST00000411256 107 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 VTA1P1-201ENST00000414044 866 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AL157831.1-201ENST00000426134 473 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 SKP1P3-201ENST00000429280 487 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 RPS27P5-201ENST00000444247 244 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 ABCF2P2-201ENST00000450549 296 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 RPL30P11-201ENST00000495304 339 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC022790.1-201ENST00000522872 204 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC090819.1-201ENST00000523800 1111 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 TRAV8-5-201ENST00000537369 341 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC006064.5-201ENST00000541782 248 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 FAM27D1-201ENST00000612308 341 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC114781.5-201ENST00000615297 108 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AP000843.1-201ENST00000624880 701 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 AC105074.1-201ENST00000623380 3095 ntBASIC4.25□□□□□ -1.73
LDLRAP1Q5SW96 IQCB2P-201ENST00000401788 1633 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 MTND5P11-201ENST00000511037 1812 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC067945.1-201ENST00000342609 618 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 RNU1-15P-201ENST00000353977 144 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 RNU1-14P-201ENST00000362759 152 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 SNORD66.1-201ENST00000391230 76 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 VN1R8P-201ENST00000407739 893 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 TATDN1P1-201ENST00000414123 891 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL161631.1-201ENST00000417933 486 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 MFSD13B-201ENST00000420133 1290 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL031736.2-201ENST00000426573 787 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL353748.1-201ENST00000440753 474 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 FTH1P24-201ENST00000503502 462 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 PARP4P3-201ENST00000510265 317 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC008958.1-201ENST00000511047 682 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 RNA5SP49-201ENST00000516450 115 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 VTA1P2-201ENST00000520205 911 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 HIGD1AP5-201ENST00000529959 259 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AC025260.1-201ENST00000548858 430 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL161713.1-201ENST00000555538 145 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 IPO5P1-202ENST00000600039 287 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 CFTRP2-201ENST00000634304 199 ntBASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRAP1Q5SW96 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms