Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL359922.2-201ENST00000581788 3017 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC011592.1-201ENST00000624647 3634 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 LINC02019-201ENST00000608605 2060 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 KPNA2P2-201ENST00000419546 1489 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 RPL24P7-201ENST00000399435 453 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 SNORA11B-201ENST00000408175 129 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 TUBB4BP6-201ENST00000437576 479 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 NOTCH2P1-201ENST00000443481 624 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 RPL21P133-201ENST00000443666 476 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 RPL31P44-201ENST00000447680 377 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 RPL31P11-202ENST00000454082 372 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 FTH1P2-201ENST00000466086 412 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 AP000797.2-201ENST00000475768 606 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 RPL23AP8-201ENST00000479812 475 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 RN7SL797P-201ENST00000486314 297 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 SERF1AP1-201ENST00000514575 187 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 RN7SKP11-201ENST00000517018 287 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 AP000907.2-201ENST00000530827 353 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 MIR4643-201ENST00000577473 78 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 AP001486.3-201ENST00000615334 372 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 uc_338.12-201ENST00000616344 181 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 AL096816.1-201ENST00000623300 2920 ntBASIC7.56□□□□□ -1.2
VARS2Q5ST30 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARS2Q5ST30 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
VARS2Q5ST30 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 RN7SKP115-201ENST00000363177 317 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RNU6-306P-201ENST00000384617 107 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 DHFRP6-201ENST00000401776 268 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL136131.1-201ENST00000406079 803 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL136100.1-201ENST00000407696 330 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC012065.2-201ENST00000421295 375 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC233981.1-201ENST00000423224 461 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 OSTCP4-201ENST00000424397 449 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RPL7P37-201ENST00000425095 738 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 RPL21P89-201ENST00000444021 467 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 RN7SL372P-201ENST00000461982 298 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC079080.1-201ENST00000479841 822 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RN7SL502P-201ENST00000481857 290 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC066616.1-201ENST00000486795 413 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RPS23P5-201ENST00000495419 428 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 IL7R-208ENST00000511982 612 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 SCARNA6-201ENST00000515982 265 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RNA5SP473-201ENST00000516402 125 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AF186190.1-201ENST00000517470 480 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC087360.1-201ENST00000518788 616 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 HIGD1AP6-201ENST00000521833 279 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms