Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC009963.2-201ENST00000453431 138 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 MTND2P28-201ENST00000457540 1044 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 RPS27P23-201ENST00000487608 251 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL049874.2-201ENST00000492636 288 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC021146.8-201ENST00000507455 733 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC109471.1-201ENST00000511631 612 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 RNU6-1129P-201ENST00000515964 104 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 HMGB1P19-201ENST00000517578 577 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 NBEAP1-201ENST00000554452 979 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC068714.1-201ENST00000559623 800 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 BPTFP1-201ENST00000579209 492 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC115085.1-201ENST00000588924 229 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC023813.4-201ENST00000607580 580 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL360219.1-201ENST00000610230 366 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL392048.1-201ENST00000613946 534 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC083809.1-201ENST00000615051 472 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC009704.2-201ENST00000618739 483 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC119744.1-201ENST00000454746 1715 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC025263.3-201ENST00000622965 1396 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SNORA66-201ENST00000384792 133 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SNORD65.1-201ENST00000390889 71 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 GLULP6-201ENST00000399502 913 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 OR51A3P-201ENST00000413596 924 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC007435.1-201ENST00000421086 415 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC009480.2-201ENST00000422916 432 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 CNOT7P1-201ENST00000429006 852 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 RPL7P4-203ENST00000430239 730 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 MTND1P32-201ENST00000433043 938 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC092393.1-201ENST00000439625 742 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL591623.2-201ENST00000449978 222 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC126121.1-201ENST00000482313 553 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC068587.1-201ENST00000483613 781 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 IGBP1P4-201ENST00000503202 879 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 MRPS33P3-201ENST00000513456 322 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 NDUFB4P12-201ENST00000513465 390 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 MIR3667-201ENST00000581025 74 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL139124.1-201ENST00000609123 421 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC244107.2-201ENST00000611773 76 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL450489.1-201ENST00000612071 468 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms