Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPL7P27-201ENST00000403775 720 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 MIR1193-201ENST00000408109 78 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP41Q3LFD5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 Z80107.1-201ENST00000436830 412 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP41Q3LFD5 RRM2P4-201ENST00000441721 562 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 SEPT14P24-201ENST00000447236 180 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC005008.1-201ENST00000456151 612 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC026414.1-201ENST00000504046 698 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC083923.1-201ENST00000523708 376 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 MTCO2P2-201ENST00000591258 225 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 CYCSP41-201ENST00000616920 296 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 STMN1P1-201ENST00000617809 440 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 AC024595.1-201ENST00000623088 387 ntBASIC4.8□□□□□ -1.64
USP41Q3LFD5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP41Q3LFD5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP41Q3LFD5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP41Q3LFD5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP41Q3LFD5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 LINC00622-201ENST00000562811 1570 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC092079.1-201ENST00000558620 1985 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 MCTS2P-201ENST00000394552 546 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 RPS24P12-201ENST00000402084 394 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 SNORA11-201ENST00000408789 128 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC004448.2-201ENST00000422360 586 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 MTCO2P17-201ENST00000424336 677 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 RPS27AP12-201ENST00000429552 465 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 YWHAEP5-201ENST00000431545 765 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 MTCO1P53-201ENST00000441633 699 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC012671.1-201ENST00000451912 203 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC104108.1-201ENST00000509930 412 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AP001372.4-201ENST00000524889 472 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 BNIP3P5-201ENST00000562290 498 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC007224.1-201ENST00000564410 144 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC095057.3-201ENST00000567102 1157 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 MTND1P8-201ENST00000571424 950 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 MIR3160-1-201ENST00000577972 85 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC020634.1-201ENST00000608701 549 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AL445567.2-201ENST00000618935 498 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 OR2L1P-202ENST00000641567 1023 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USP41Q3LFD5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 AC010329.2-201ENST00000595195 2737 ntBASIC4.79□□□□□ -1.64
USP41Q3LFD5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP41Q3LFD5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
USP41Q3LFD5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USP41Q3LFD5 RNF6P1-201ENST00000444889 1784 ntBASIC4.78□□□□□ -1.64
USP41Q3LFD5 AL355852.1-201ENST00000454081 1771 ntBASIC4.78□□□□□ -1.64
USP41Q3LFD5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
USP41Q3LFD5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms