Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC025125.1-201ENST00000624743 1922 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ERCC6-202ENST00000374127 1782 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 MIR208A-201ENST00000362287 71 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 U8.11-201ENST00000384699 133 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 U8.12-201ENST00000384701 133 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 NPM1P10-201ENST00000398310 865 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 U8.18-201ENST00000459285 133 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC110792.1-201ENST00000491826 472 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC108022.1-201ENST00000493466 478 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC067904.2-201ENST00000517322 1283 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 MTND1P6-201ENST00000523621 946 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 PHBP17-201ENST00000528576 541 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AL592436.1-201ENST00000605135 558 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 HMGB1P51-201ENST00000605166 638 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AL354798.1-201ENST00000622505 329 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 AC119674.1-212ENST00000641155 993 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 MTND4P26-201ENST00000415971 1359 ntBASIC4.76□□□□□ -1.65
SHROOM1Q2M3G4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 OR5T3-201ENST00000303059 1023 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 RNA5SP502-201ENST00000362694 119 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 MIR7-1-201ENST00000384871 110 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 RPL31P52-201ENST00000407532 367 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL356806.1-201ENST00000422524 916 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL451062.2-201ENST00000427515 271 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC018644.1-201ENST00000429934 551 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL645939.1-201ENST00000453429 797 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 DEFB109F-201ENST00000491870 277 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC063950.1-201ENST00000552036 308 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC092868.3-201ENST00000560515 784 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC139769.3-201ENST00000618383 175 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC073530.2-201ENST00000623987 261 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 MAPK10-303ENST00000641324 3959 ntBASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM1Q2M3G4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RNU1-85P-201ENST00000364127 164 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 MIR421-201ENST00000365696 85 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms