Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL16A1Q07092 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL16A1Q07092 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL16A1Q07092 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL16A1Q07092 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.95□□□□□ -1.62
COL16A1Q07092 RPS15AP29-201ENST00000445539 400 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 DEFB109F-201ENST00000491870 277 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AC023141.12-201ENST00000512399 199 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AL137246.1-201ENST00000607072 977 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
COL16A1Q07092 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL16A1Q07092 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL16A1Q07092 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.95□□□□□ -1.62
COL16A1Q07092 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
COL16A1Q07092 AC090337.1-201ENST00000579651 2074 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 SAMMSON-213ENST00000641336 1521 ntBASIC4.95□□□□□ -1.62
COL16A1Q07092 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL16A1Q07092 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 SNORA48.8-201ENST00000391324 134 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 GSTA8P-201ENST00000404253 637 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AL024507.1-201ENST00000412741 274 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 LIPT1P1-201ENST00000415870 1186 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.94□□□□□ -1.62
COL16A1Q07092 AC107083.1-201ENST00000439643 279 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AC025554.1-201ENST00000505641 188 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL16A1Q07092 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL16A1Q07092 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL16A1Q07092 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.94□□□□□ -1.62
COL16A1Q07092 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 VN1R8P-201ENST00000407739 893 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.94□□□□□ -1.62
COL16A1Q07092 BX323014.1-201ENST00000412876 237 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AC004448.2-201ENST00000422360 586 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 OOSP1P1-201ENST00000423265 274 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.94□□□□□ -1.62
COL16A1Q07092 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.94□□□□□ -1.62
COL16A1Q07092 AL031584.1-201ENST00000447169 754 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.94□□□□□ -1.62
COL16A1Q07092 RPL12P22-201ENST00000519073 490 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 AC092747.2-201ENST00000545069 983 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 SLC25A36P1-201ENST00000590111 465 ntBASIC4.94□□□□□ -1.62
COL16A1Q07092 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL16A1Q07092 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL16A1Q07092 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL16A1Q07092 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL16A1Q07092 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 SNORA44-201ENST00000384584 132 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 AL357075.1-201ENST00000404107 726 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.93□□□□□ -1.62
COL16A1Q07092 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.93□□□□□ -1.62
COL16A1Q07092 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL16A1Q07092 AC138938.1-201ENST00000515431 782 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 UBE2NP1-201ENST00000545592 458 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.93□□□□□ -1.62
COL16A1Q07092 AC084036.1-201ENST00000609190 508 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.93□□□□□ -1.62
COL16A1Q07092 BMS1P21-201ENST00000634565 365 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 AL773545.4-201ENST00000637262 310 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 AL513478.4-201ENST00000641636 310 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.93□□□□□ -1.62
COL16A1Q07092 AC011503.2-201ENST00000594230 1500 ntBASIC4.93□□□□□ -1.62
COL16A1Q07092 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL16A1Q07092 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 AC007685.1-201ENST00000329806 452 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 IL6STP1-201ENST00000346911 1020 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.92□□□□□ -1.62
COL16A1Q07092 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 AL691447.1-201ENST00000419456 387 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.92□□□□□ -1.62
COL16A1Q07092 CKS1BP3-201ENST00000600888 237 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms