Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MTND5P21-201ENST00000531961 522 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 TRAV8-5-201ENST00000537369 341 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AL389895.1-201ENST00000554127 252 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC007599.1-201ENST00000568688 1174 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MIR4330-201ENST00000579077 105 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC012417.1-201ENST00000582307 1039 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 IPO5P1-202ENST00000600039 287 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC234771.5-201ENST00000600161 514 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 SEPT7P7-201ENST00000420492 1301 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 USP8P1-201ENST00000494673 3183 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC116667.1-201ENST00000604855 2072 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 OR4K17-201ENST00000315543 1032 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 MIR383-201ENST00000362257 73 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RNA5SP509-201ENST00000364577 119 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RNA5SP167-201ENST00000365461 116 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 MIR92A2-201ENST00000385299 75 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC069218.2-201ENST00000411665 344 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 FAR2P2-201ENST00000413041 594 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RPL23AP38-201ENST00000423801 469 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RPL30P3-201ENST00000424262 333 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 DNAJC19P7-201ENST00000428811 344 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 FCF1P7-201ENST00000451185 558 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC011276.1-201ENST00000469688 323 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RN7SL303P-201ENST00000469773 251 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AP000893.1-201ENST00000474462 794 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RN7SL691P-201ENST00000494487 301 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 MTCO1P30-201ENST00000515244 580 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 PSMB7P1-201ENST00000556349 514 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AP001180.3-201ENST00000582221 145 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC006254.3-201ENST00000603353 884 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC092653.1-201ENST00000608509 531 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AL592295.2-201ENST00000612578 206 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AL589935.2-201ENST00000616471 1231 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 DCAF13P3-201ENST00000561147 1334 ntBASIC3.07□□□□□ -1.92
HIST1H1AQ02539 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H1AQ02539 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RNU1-132P-201ENST00000364300 164 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 MIR1251-201ENST00000408552 70 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 ELOCP19-201ENST00000411919 318 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC068287.1-201ENST00000430283 295 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL138799.3-201ENST00000438968 350 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC006011.1-201ENST00000442758 349 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC004801.2-202ENST00000463559 283 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RPL7P1-201ENST00000468161 747 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RPL7P9-201ENST00000468715 747 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RPS29P22-201ENST00000472363 168 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC092451.1-201ENST00000480211 153 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC108475.1-201ENST00000507880 950 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms