Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 NPM1P39-201ENST00000449818 867 ntBASIC3.68□□□□□ -1.82
CACNA1BQ00975 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.68□□□□□ -1.82
CACNA1BQ00975 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1BQ00975 AGGF1P3-201ENST00000493675 1213 ntBASIC3.68□□□□□ -1.82
CACNA1BQ00975 AL162274.2-201ENST00000614406 332 ntBASIC3.68□□□□□ -1.82
CACNA1BQ00975 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.68□□□□□ -1.82
CACNA1BQ00975 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1BQ00975 AC100778.3-201ENST00000580060 1750 ntBASIC3.68□□□□□ -1.82
CACNA1BQ00975 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1BQ00975 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.68□□□□□ -1.82
CACNA1BQ00975 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.68□□□□□ -1.82
CACNA1BQ00975 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1BQ00975 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1BQ00975 AC068870.3-201ENST00000625077 2536 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 RNU4-82P-201ENST00000362443 140 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AL445529.1-201ENST00000398713 389 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 MIR887-201ENST00000401258 79 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AL024507.1-201ENST00000412741 274 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AL356968.2-201ENST00000412769 1257 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 RPL23AP37-201ENST00000479658 549 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 RNA5SP360-201ENST00000516555 118 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AC022655.2-201ENST00000577280 318 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AC015914.2-201ENST00000618167 288 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 MIR7843-201ENST00000622274 79 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 RNA5SP187-201ENST00000384400 119 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 ZNF602P-201ENST00000405929 924 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 BX119904.3-201ENST00000428194 957 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 AL513124.1-201ENST00000450410 614 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 RPS29P19-201ENST00000479709 171 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 MIR3162-201ENST00000581818 82 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 AC007546.2-201ENST00000623996 360 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1BQ00975 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CACNA1BQ00975 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.67□□□□□ -1.82
CACNA1BQ00975 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ZNF807-201ENST00000328088 1707 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 MIR7-2-201ENST00000384970 110 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL513477.1-202ENST00000417061 214 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC073508.1-201ENST00000428866 656 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC005019.1-201ENST00000436455 431 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC005002.1-201ENST00000447458 540 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 RPL36AP13-201ENST00000457490 317 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 RPS20P22-201ENST00000473700 357 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 NPM1P28-201ENST00000492269 840 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 RNA5SP303-201ENST00000516192 130 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL606834.2-201ENST00000602954 668 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 U3.19-201ENST00000390893 196 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL035407.1-201ENST00000429211 571 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL603825.1-201ENST00000438481 80 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC073387.1-201ENST00000453261 709 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC011611.1-201ENST00000552179 197 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 AC244505.7-201ENST00000599675 272 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 RNU1-30P-201ENST00000606575 163 ntBASIC3.66□□□□□ -1.82
CACNA1BQ00975 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1BQ00975 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1BQ00975 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1BQ00975 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CACNA1BQ00975 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1BQ00975 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CACNA1BQ00975 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CACNA1BQ00975 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms