Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPS27AP17-201ENST00000463344 455 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 RPS23P7-201ENST00000466210 444 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC108751.2-201ENST00000469993 231 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC091959.2-201ENST00000477363 321 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC026979.1-201ENST00000492525 396 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 UBE2V1P12-201ENST00000503954 474 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 RNA5SP497-201ENST00000516081 97 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC091163.3-201ENST00000518269 1144 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC104417.1-201ENST00000523974 751 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 AC087897.1-201ENST00000550134 156 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 RN7SL339P-201ENST00000580597 296 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC110743.1-201ENST00000584870 478 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 HMGB2P1-201ENST00000591146 634 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 VN1R88P-201ENST00000596787 292 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AL445423.1-201ENST00000609941 536 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 AC083809.1-201ENST00000615051 472 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDK3Q00526 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CDK3Q00526 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC046144.1-201ENST00000478559 1853 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDK3Q00526 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.4□□□□□ -1.7
CDK3Q00526 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDK3Q00526 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDK3Q00526 NXPH1-205ENST00000602349 1953 ntBASIC4.4□□□□□ -1.7
CDK3Q00526 AC022031.1-201ENST00000585985 2593 ntBASIC4.4□□□□□ -1.7
CDK3Q00526 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDK3Q00526 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.4□□□□□ -1.7
CDK3Q00526 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC008033.1-201ENST00000216407 1162 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 OR5P1P-201ENST00000299512 925 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 RNU6-236P-201ENST00000363886 106 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 VDAC2P1-201ENST00000399358 958 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK3Q00526 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC004690.1-201ENST00000418216 328 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 RPS29P17-201ENST00000430795 166 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AL353597.2-202ENST00000434901 373 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 ACTR3P2-201ENST00000439585 1257 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC004854.1-201ENST00000440356 349 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 TPT1P12-201ENST00000448968 492 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 MRPL35P4-201ENST00000453682 566 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC244505.3-201ENST00000454598 187 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 BX248409.1-201ENST00000455497 255 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 RN7SL98P-201ENST00000462271 300 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK3Q00526 PPIAP21-201ENST00000464473 501 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC112206.1-201ENST00000468416 477 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC073522.1-201ENST00000483312 377 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 RPS4XP18-201ENST00000495480 763 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 GTF2IP9-201ENST00000502460 301 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC008837.1-201ENST00000511513 412 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 RNU6-1028P-201ENST00000517164 93 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 IGJP1-201ENST00000522682 475 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.4□□□□□ -1.71
CDK3Q00526 OR8I1P-201ENST00000529291 931 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 MIR4509-3-201ENST00000578671 94 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK3Q00526 MIR4509-2-201ENST00000583920 94 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC090181.2-201ENST00000602975 672 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC103792.1-201ENST00000603591 919 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK3Q00526 VN1R74P-201ENST00000613259 503 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 MIR4509-1-201ENST00000618224 94 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 AC015908.5-201ENST00000623289 343 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK3Q00526 AC134882.1-201ENST00000603738 1676 ntBASIC4.4□□□□□ -1.71
CDK3Q00526 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK3Q00526 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK3Q00526 USP9YP4-201ENST00000424401 1745 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms