Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 AC022662.1-201ENST00000580252 331 ntBASIC5.1□□□□□ -1.59
COPB1P53618 MIR4436B2-201ENST00000581415 91 ntBASIC5.1□□□□□ -1.59
COPB1P53618 MIR4436B1-201ENST00000583272 91 ntBASIC5.1□□□□□ -1.59
COPB1P53618 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 SLC25A36P1-201ENST00000590111 465 ntBASIC5.1□□□□□ -1.59
COPB1P53618 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 AP003392.5-201ENST00000607857 415 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC068620.4-201ENST00000636730 1182 ntBASIC5.1□□□□□ -1.59
COPB1P53618 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPB1P53618 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPB1P53618 MAPK10-349ENST00000641767 3661 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
COPB1P53618 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPB1P53618 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.09□□□□□ -1.59
COPB1P53618 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
COPB1P53618 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPB1P53618 Z98755.1-201ENST00000407015 1384 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC005261.4-201ENST00000600047 1385 ntBASIC5.09□□□□□ -1.59
COPB1P53618 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.09□□□□□ -1.59
COPB1P53618 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPB1P53618 Y_RNA.318-201ENST00000365131 97 ntBASIC5.09□□□□□ -1.59
COPB1P53618 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COPB1P53618 RN7SKP167-201ENST00000411047 285 ntBASIC5.09□□□□□ -1.59
COPB1P53618 RAP1BP1-201ENST00000412709 553 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AL591848.1-201ENST00000413092 322 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 AC234781.4-201ENST00000419384 244 ntBASIC5.09□□□□□ -1.59
COPB1P53618 RPF2P1-201ENST00000424137 906 ntBASIC5.09□□□□□ -1.59
COPB1P53618 RPL21P91-201ENST00000429231 479 ntBASIC5.09□□□□□ -1.59
COPB1P53618 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.09□□□□□ -1.59
COPB1P53618 COX7BP2-201ENST00000437976 242 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 AL353093.1-201ENST00000441292 436 ntBASIC5.09□□□□□ -1.59
COPB1P53618 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 MTND1P29-201ENST00000448112 647 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 snoU13.20-201ENST00000459180 104 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.09□□□□□ -1.59
COPB1P53618 snoZ278.1-201ENST00000517059 112 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 AC010306.1-201ENST00000523223 1117 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC083923.1-201ENST00000523708 376 ntBASIC5.09□□□□□ -1.59
COPB1P53618 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 AL358913.1-201ENST00000554342 121 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.09□□□□□ -1.59
COPB1P53618 MTCO1P40-201ENST00000574371 625 ntBASIC5.09□□□□□ -1.59
COPB1P53618 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.09□□□□□ -1.59
COPB1P53618 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.09□□□□□ -1.59
COPB1P53618 RPL7P50-201ENST00000600588 727 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AL451086.1-201ENST00000605596 223 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC122108.2-201ENST00000611946 526 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC011472.4-201ENST00000615848 491 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC139769.3-201ENST00000618383 175 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC109454.4-201ENST00000623411 649 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC103706.2-201ENST00000638080 240 ntBASIC5.09□□□□□ -1.59
COPB1P53618 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPB1P53618 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPB1P53618 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.09□□□□□ -1.59
COPB1P53618 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.09□□□□□ -1.59
COPB1P53618 AC107021.2-201ENST00000567714 2095 ntBASIC5.09□□□□□ -1.59
COPB1P53618 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.09□□□□□ -1.6
COPB1P53618 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.09□□□□□ -1.6
COPB1P53618 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 AC006042.3-201ENST00000454684 1469 ntBASIC5.08□□□□□ -1.6
COPB1P53618 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.08□□□□□ -1.6
COPB1P53618 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 SCN1A-220ENST00000641603 12506 ntBASIC5.08□□□□□ -1.6
COPB1P53618 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COPB1P53618 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 RNU6-532P-201ENST00000384318 107 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AL079342.2-201ENST00000403367 482 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AP000357.1-201ENST00000409926 1165 ntBASIC5.08□□□□□ -1.6
COPB1P53618 RNU4-72P-201ENST00000410754 173 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC016907.1-201ENST00000419483 435 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AL390023.1-201ENST00000428836 262 ntBASIC5.08□□□□□ -1.6
COPB1P53618 CYCSP11-201ENST00000436426 315 ntBASIC5.08□□□□□ -1.6
COPB1P53618 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 AC108463.1-201ENST00000450258 347 ntBASIC5.08□□□□□ -1.6
COPB1P53618 NPM1P13-201ENST00000452663 865 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms