Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.42□□□□□ -1.7
ACLYP53396 IGKV2D-19-201ENST00000523346 262 ntBASIC4.42□□□□□ -1.7
ACLYP53396 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.42□□□□□ -1.7
ACLYP53396 AC090312.1-201ENST00000580637 348 ntBASIC4.42□□□□□ -1.7
ACLYP53396 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.42□□□□□ -1.7
ACLYP53396 AC016957.2-201ENST00000616998 848 ntBASIC4.42□□□□□ -1.7
ACLYP53396 AC005086.4-201ENST00000623065 213 ntBASIC4.42□□□□□ -1.7
ACLYP53396 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACLYP53396 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACLYP53396 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
ACLYP53396 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.7
ACLYP53396 AL450326.2-201ENST00000421913 1962 ntBASIC4.42□□□□□ -1.7
ACLYP53396 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
ACLYP53396 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.41□□□□□ -1.7
ACLYP53396 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 RNA5SP399-201ENST00000364003 117 ntBASIC4.41□□□□□ -1.7
ACLYP53396 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ACLYP53396 MIR183-201ENST00000384958 110 ntBASIC4.41□□□□□ -1.7
ACLYP53396 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ACLYP53396 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 RPS29P4-201ENST00000414733 161 ntBASIC4.41□□□□□ -1.7
ACLYP53396 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.41□□□□□ -1.7
ACLYP53396 AC099063.2-201ENST00000446360 662 ntBASIC4.41□□□□□ -1.7
ACLYP53396 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 RPL31P20-201ENST00000449593 360 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
ACLYP53396 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.41□□□□□ -1.7
ACLYP53396 PLGLA-201ENST00000465668 449 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC012158.1-204ENST00000483430 465 ntBASIC4.41□□□□□ -1.7
ACLYP53396 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 UBE2CP3-201ENST00000502715 450 ntBASIC4.41□□□□□ -1.7
ACLYP53396 HAUS1P1-201ENST00000505275 832 ntBASIC4.41□□□□□ -1.7
ACLYP53396 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 STMN1P2-201ENST00000508435 439 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 IGHV3-63-201ENST00000518422 341 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 OR8I1P-201ENST00000529291 931 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.41□□□□□ -1.7
ACLYP53396 NPM1P35-201ENST00000533043 868 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC008759.1-201ENST00000589783 983 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.41□□□□□ -1.7
ACLYP53396 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AP005264.7-201ENST00000625003 745 ntBASIC4.41□□□□□ -1.7
ACLYP53396 AC087565.3-202ENST00000642085 1603 ntBASIC4.41□□□□□ -1.7
ACLYP53396 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 AP002001.2-201ENST00000529025 1469 ntBASIC4.41□□□□□ -1.7
ACLYP53396 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ACLYP53396 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.41□□□□□ -1.7
ACLYP53396 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
ACLYP53396 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACLYP53396 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
ACLYP53396 AC073346.2-201ENST00000624724 2058 ntBASIC4.41□□□□□ -1.7
ACLYP53396 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
ACLYP53396 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACLYP53396 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACLYP53396 BMS1P3-201ENST00000372011 932 ntBASIC4.4□□□□□ -1.71
ACLYP53396 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
ACLYP53396 RNU6-178P-201ENST00000384631 104 ntBASIC4.4□□□□□ -1.71
ACLYP53396 SNORD96B-201ENST00000386148 79 ntBASIC4.4□□□□□ -1.71
ACLYP53396 SNORD65-201ENST00000391079 73 ntBASIC4.4□□□□□ -1.71
ACLYP53396 NCSTNP1-201ENST00000406229 144 ntBASIC4.4□□□□□ -1.71
ACLYP53396 RNU2-65P-201ENST00000410162 185 ntBASIC4.4□□□□□ -1.71
ACLYP53396 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.4□□□□□ -1.71
ACLYP53396 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.4□□□□□ -1.71
ACLYP53396 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.4□□□□□ -1.71
ACLYP53396 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.4□□□□□ -1.71
ACLYP53396 AL590609.2-201ENST00000421430 368 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.4□□□□□ -1.71
ACLYP53396 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACLYP53396 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.4□□□□□ -1.71
ACLYP53396 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.4□□□□□ -1.71
ACLYP53396 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
ACLYP53396 MTND1P6-201ENST00000523621 946 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.4□□□□□ -1.71
ACLYP53396 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.4□□□□□ -1.71
ACLYP53396 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.4□□□□□ -1.71
ACLYP53396 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.4□□□□□ -1.71
ACLYP53396 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.4□□□□□ -1.71
ACLYP53396 AC005412.1-201ENST00000580812 1049 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
ACLYP53396 AC009303.3-201ENST00000591103 736 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AL160281.1-201ENST00000605307 311 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AL133370.2-201ENST00000619934 439 ntBASIC4.4□□□□□ -1.71
ACLYP53396 AC007342.8-201ENST00000623278 678 ntBASIC4.4□□□□□ -1.71
ACLYP53396 U6.105-201ENST00000637379 88 ntBASIC4.4□□□□□ -1.71
ACLYP53396 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACLYP53396 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms