Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC091390.3-201ENST00000426478 338 ntBASIC4.52□□□□□ -1.69
NUP98P52948 SNORD105B-201ENST00000458770 79 ntBASIC4.52□□□□□ -1.69
NUP98P52948 AC139783.2-201ENST00000504847 1145 ntBASIC4.52□□□□□ -1.69
NUP98P52948 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP98P52948 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP98P52948 KLKP1-201ENST00000595979 403 ntBASIC4.52□□□□□ -1.69
NUP98P52948 AC115621.1-201ENST00000604653 858 ntBASIC4.52□□□□□ -1.69
NUP98P52948 AC018690.1-201ENST00000608144 626 ntBASIC4.52□□□□□ -1.69
NUP98P52948 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
NUP98P52948 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP98P52948 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.52□□□□□ -1.69
NUP98P52948 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
NUP98P52948 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NUP98P52948 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUP98P52948 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUP98P52948 BDP1P-201ENST00000582658 1990 ntBASIC4.51□□□□□ -1.69
NUP98P52948 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 AL590609.2-201ENST00000421430 368 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 AL365440.1-201ENST00000436135 2167 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP98P52948 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 MRPS35P3-201ENST00000603189 709 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
NUP98P52948 AP000542.2-201ENST00000623199 6179 ntBASIC4.51□□□□□ -1.69
NUP98P52948 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 CDY3P-201ENST00000454543 1618 ntBASIC4.51□□□□□ -1.69
NUP98P52948 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NUP98P52948 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP98P52948 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NUP98P52948 OSTCP5-201ENST00000425293 453 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP98P52948 RBMY2UP-201ENST00000453474 324 ntBASIC4.51□□□□□ -1.69
NUP98P52948 FTH1P24-201ENST00000503502 462 ntBASIC4.51□□□□□ -1.69
NUP98P52948 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 IGHV3-63-201ENST00000518422 341 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP98P52948 DUX4L52-201ENST00000549363 777 ntBASIC4.51□□□□□ -1.69
NUP98P52948 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP98P52948 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP98P52948 MIR8057-201ENST00000620957 69 ntBASIC4.51□□□□□ -1.69
NUP98P52948 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.51□□□□□ -1.69
NUP98P52948 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP98P52948 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP98P52948 FRG1CP-201ENST00000358464 769 ntBASIC4.5□□□□□ -1.69
NUP98P52948 U3.39-201ENST00000408569 239 ntBASIC4.5□□□□□ -1.69
NUP98P52948 CBX1P3-201ENST00000413296 527 ntBASIC4.5□□□□□ -1.69
NUP98P52948 AC096638.2-201ENST00000434965 711 ntBASIC4.5□□□□□ -1.69
NUP98P52948 RPL21P6-201ENST00000479171 504 ntBASIC4.5□□□□□ -1.69
NUP98P52948 TRBV12-2-201ENST00000489763 344 ntBASIC4.5□□□□□ -1.69
NUP98P52948 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP98P52948 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP98P52948 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP98P52948 AL121834.1-201ENST00000572284 509 ntBASIC4.5□□□□□ -1.69
NUP98P52948 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP98P52948 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
NUP98P52948 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP98P52948 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP98P52948 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NUP98P52948 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP98P52948 HLFP1-201ENST00000402375 499 ntBASIC4.49□□□□□ -1.69
NUP98P52948 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP98P52948 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP98P52948 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP98P52948 SNORA70.24-201ENST00000517233 118 ntBASIC4.49□□□□□ -1.69
NUP98P52948 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP98P52948 AC018816.2-201ENST00000621460 353 ntBASIC4.49□□□□□ -1.69
NUP98P52948 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP98P52948 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
NUP98P52948 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NUP98P52948 ZNF833P-201ENST00000424938 1494 ntBASIC4.49□□□□□ -1.69
NUP98P52948 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUP98P52948 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP98P52948 AL691447.1-201ENST00000419456 387 ntBASIC4.49□□□□□ -1.69
NUP98P52948 YWHAQP9-201ENST00000445891 512 ntBASIC4.49□□□□□ -1.69
NUP98P52948 BTF3P5-201ENST00000457252 467 ntBASIC4.49□□□□□ -1.69
NUP98P52948 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUP98P52948 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUP98P52948 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.49□□□□□ -1.69
NUP98P52948 ZNF415P1-201ENST00000582279 1166 ntBASIC4.49□□□□□ -1.69
NUP98P52948 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.49□□□□□ -1.69
NUP98P52948 AC006116.10-201ENST00000591836 581 ntBASIC4.49□□□□□ -1.69
NUP98P52948 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms