Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX1P48742 AC025884.1-201ENST00000556034 378 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AC084759.1-201ENST00000561168 290 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AC005156.1-201ENST00000613371 573 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AL731566.2-201ENST00000618971 317 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AC010872.1-201ENST00000624225 675 ntBASIC4.54□□□□□ -1.68
LHX1P48742 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX1P48742 RNF6P1-201ENST00000444889 1784 ntBASIC4.54□□□□□ -1.68
LHX1P48742 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LHX1P48742 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 RPL22P22-201ENST00000395439 379 ntBASIC4.53□□□□□ -1.68
LHX1P48742 NCSTNP1-201ENST00000406229 144 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 AC004448.2-201ENST00000422360 586 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC099336.2-201ENST00000422457 254 ntBASIC4.53□□□□□ -1.68
LHX1P48742 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.53□□□□□ -1.68
LHX1P48742 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 ABCF2P2-201ENST00000450549 296 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC099560.2-201ENST00000457554 255 ntBASIC4.53□□□□□ -1.68
LHX1P48742 RN7SL809P-201ENST00000482040 297 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC068587.1-201ENST00000483613 781 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.53□□□□□ -1.68
LHX1P48742 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LHX1P48742 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.53□□□□□ -1.68
LHX1P48742 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.53□□□□□ -1.68
LHX1P48742 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 AC019227.1-201ENST00000526902 510 ntBASIC4.53□□□□□ -1.68
LHX1P48742 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.53□□□□□ -1.68
LHX1P48742 TOMM20P2-201ENST00000540082 421 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 AC006116.5-201ENST00000591936 559 ntBASIC4.53□□□□□ -1.68
LHX1P48742 PSMA6P4-201ENST00000603247 718 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AL137072.1-201ENST00000603444 466 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC123786.2-201ENST00000603459 275 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC096553.1-201ENST00000605169 829 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AL008729.2-201ENST00000606393 473 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC006213.4-201ENST00000616184 634 ntBASIC4.53□□□□□ -1.68
LHX1P48742 U6.48-201ENST00000618523 106 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AC073569.3-201ENST00000619055 682 ntBASIC4.53□□□□□ -1.68
LHX1P48742 AL391262.2-201ENST00000622466 494 ntBASIC4.53□□□□□ -1.68
LHX1P48742 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX1P48742 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX1P48742 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LHX1P48742 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.69
LHX1P48742 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.52□□□□□ -1.69
LHX1P48742 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 RNU6-468P-201ENST00000384003 109 ntBASIC4.52□□□□□ -1.69
LHX1P48742 MIR92A2-201ENST00000385299 75 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC093719.1-202ENST00000392735 373 ntBASIC4.52□□□□□ -1.69
LHX1P48742 HMGB3P19-201ENST00000403971 560 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AL590290.1-201ENST00000405336 380 ntBASIC4.52□□□□□ -1.69
LHX1P48742 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 AL161631.1-201ENST00000417933 486 ntBASIC4.52□□□□□ -1.69
LHX1P48742 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.52□□□□□ -1.69
LHX1P48742 AC073310.1-201ENST00000423226 1033 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 COX6CP15-201ENST00000426313 211 ntBASIC4.52□□□□□ -1.69
LHX1P48742 DEFB130D-201ENST00000426866 237 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.52□□□□□ -1.69
LHX1P48742 COX6B1P7-201ENST00000430845 235 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC092013.1-201ENST00000438795 332 ntBASIC4.52□□□□□ -1.69
LHX1P48742 EEF1A1P1-201ENST00000447052 739 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 AL035407.2-201ENST00000454090 378 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms