Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 UBE2V1P3-201ENST00000439651 417 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.55□□□□□ -1.52
COL15A1P39059 CDY12P-201ENST00000440679 1015 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 CDY13P-201ENST00000445813 1015 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 CDY23P-201ENST00000451661 1014 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 SNORD11.1-201ENST00000459482 85 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC022034.3-201ENST00000471393 478 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 RNA5SP497-201ENST00000516081 97 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 RNA5SP519-201ENST00000516480 119 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 SNORA67.7-201ENST00000516664 135 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 RNU1-45P-201ENST00000517191 141 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 IGHV3-63-201ENST00000518422 341 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 VN1R87P-201ENST00000596706 487 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC018618.2-201ENST00000604770 446 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC079610.2-201ENST00000604818 690 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC006840.1-201ENST00000623069 542 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 AC107021.2-201ENST00000567714 2095 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
COL15A1P39059 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.54□□□□□ -1.52
COL15A1P39059 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.54□□□□□ -1.52
COL15A1P39059 TCP11X1-202ENST00000622971 1372 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 RNA5SP130-201ENST00000364431 114 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 AC104297.1-201ENST00000393779 870 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 RPL7P27-201ENST00000403775 720 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 RPL21P65-201ENST00000406094 466 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.54□□□□□ -1.52
COL15A1P39059 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 AL451062.2-201ENST00000427515 271 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 USP9YP24-201ENST00000434374 697 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.54□□□□□ -1.52
COL15A1P39059 USP9YP17-201ENST00000444617 696 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 MTND1P31-201ENST00000449206 961 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC092155.2-201ENST00000454675 477 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 METTL15P1-201ENST00000481421 1045 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 RNU6-311P-201ENST00000516224 102 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC023632.4-201ENST00000517783 191 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 LRRC6P1-201ENST00000532188 885 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.54□□□□□ -1.52
COL15A1P39059 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.54□□□□□ -1.52
COL15A1P39059 AC027455.1-201ENST00000574104 594 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 MIR4286-201ENST00000580651 93 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 MIR3158-1-201ENST00000583596 81 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.54□□□□□ -1.52
COL15A1P39059 AP004607.9-201ENST00000618202 316 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC140113.4-201ENST00000622087 222 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC112484.5-201ENST00000624189 228 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC112200.1-201ENST00000625015 234 ntBASIC5.54□□□□□ -1.52
COL15A1P39059 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.54□□□□□ -1.52
COL15A1P39059 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL15A1P39059 AC027228.2-201ENST00000567141 2154 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL15A1P39059 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
COL15A1P39059 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.53□□□□□ -1.52
COL15A1P39059 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL15A1P39059 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.53□□□□□ -1.52
COL15A1P39059 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL15A1P39059 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL15A1P39059 RNU1-14P-201ENST00000362759 152 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL15A1P39059 MIR554-201ENST00000384874 96 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 AC233289.1-201ENST00000403700 508 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.53□□□□□ -1.52
COL15A1P39059 XKRYP1-201ENST00000423438 492 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 AL157831.1-201ENST00000426134 473 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 AC092634.2-201ENST00000428146 1010 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 COX6B1P7-201ENST00000430845 235 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 XKRYP2-201ENST00000432915 492 ntBASIC5.53□□□□□ -1.52
COL15A1P39059 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.53□□□□□ -1.52
COL15A1P39059 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.53□□□□□ -1.52
COL15A1P39059 AL162151.2-201ENST00000448875 158 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms