Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CCDC58P3-201ENST00000590792 430 ntBASIC4.89□□□□□ -1.63
HOXA11P31270 BPIFA4P-203ENST00000603168 689 ntBASIC4.89□□□□□ -1.63
HOXA11P31270 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXA11P31270 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA11P31270 AC104985.3-201ENST00000623479 597 ntBASIC4.89□□□□□ -1.63
HOXA11P31270 AC139792.2-201ENST00000624218 587 ntBASIC4.89□□□□□ -1.63
HOXA11P31270 AC016717.3-201ENST00000624730 554 ntBASIC4.89□□□□□ -1.63
HOXA11P31270 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXA11P31270 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA11P31270 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXA11P31270 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXA11P31270 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
HOXA11P31270 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXA11P31270 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXA11P31270 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 AL118496.1-201ENST00000440201 1812 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 Z95327.2-201ENST00000414579 1873 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 RNU6-481P-201ENST00000384194 107 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 SNORD116-8-201ENST00000384365 95 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 RNU6-796P-201ENST00000391086 107 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 ATP5F1P2-201ENST00000398143 760 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 GSTM3P2-201ENST00000412746 530 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 IFNWP4-201ENST00000453148 294 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 NAP1L1P3-201ENST00000462291 880 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 RPL23AP12-201ENST00000467573 473 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC109327.1-201ENST00000471666 403 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 SUMO1P1-201ENST00000497904 306 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 RNU6-1308P-201ENST00000516817 103 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 HIGD1AP18-201ENST00000520730 278 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 OR10V3P-201ENST00000525712 725 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 OSBPL9P5-201ENST00000542581 171 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC023050.2-201ENST00000544968 387 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC125611.1-201ENST00000549563 229 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 MIR3939-201ENST00000582614 106 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 MIR6716-201ENST00000613413 80 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA11P31270 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 MFSD8-213ENST00000641134 1327 ntBASIC4.88□□□□□ -1.63
HOXA11P31270 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA11P31270 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA11P31270 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXA11P31270 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXA11P31270 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXA11P31270 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA11P31270 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 RNU6-31P-201ENST00000384388 108 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 MIR513B-201ENST00000385136 84 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 OR6C69P-201ENST00000394268 893 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 LIPT1P1-201ENST00000415870 1186 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 OSTCP5-201ENST00000425293 453 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 HMGN2P27-201ENST00000427352 270 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA11P31270 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA11P31270 OR6K5P-201ENST00000447050 945 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA11P31270 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA11P31270 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXA11P31270 PRDX3P4-201ENST00000470828 747 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 IGBP1P5-201ENST00000507524 1000 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AC113420.1-201ENST00000507903 571 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AC133963.2-201ENST00000513686 578 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA11P31270 Y_RNA.688-201ENST00000516565 95 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA11P31270 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA11P31270 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA11P31270 AC007834.2-201ENST00000536310 343 ntBASIC4.87□□□□□ -1.63
HOXA11P31270 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms