Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC138915.2-201ENST00000569776 97 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB1P09429 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HMGB1P09429 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB1P09429 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB1P09429 AC008083.4-201ENST00000615076 444 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AC022306.3-201ENST00000619930 550 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HMGB1P09429 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGB1P09429 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 AL133243.3-201ENST00000617415 3004 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
HMGB1P09429 AP005901.5-201ENST00000545779 1796 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 AC025574.1-201ENST00000554784 1653 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC103591.2-201ENST00000265259 766 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 RNU6-600P-201ENST00000362524 99 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGB1P09429 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 U3.36-201ENST00000408418 213 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC013429.2-201ENST00000418798 781 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 RPF2P1-201ENST00000424137 906 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB1P09429 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 CNOT7P2-201ENST00000441051 832 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 MTCO1P53-201ENST00000441633 699 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGB1P09429 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB1P09429 RPL23AP53-201ENST00000521854 457 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB1P09429 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB1P09429 OR5D17P-201ENST00000531492 978 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AL352979.3-201ENST00000553515 247 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB1P09429 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB1P09429 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB1P09429 AC023762.1-201ENST00000603280 584 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 SUMO2P15-201ENST00000604285 278 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC124312.4-201ENST00000605533 310 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AL133445.2-201ENST00000611191 527 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 uc_338.32-201ENST00000615087 172 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC073342.3-201ENST00000624211 193 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB1P09429 AC099654.9-201ENST00000637055 678 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AC073869.10-201ENST00000642016 354 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB1P09429 KARSP3-201ENST00000571212 1504 ntBASIC5.98□□□□□ -1.45
HMGB1P09429 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HMGB1P09429 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB1P09429 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HMGB1P09429 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGB1P09429 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB1P09429 RNU5E-10P-201ENST00000363506 118 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SUGT1P1-201ENST00000379514 476 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SNORA51.6-201ENST00000384151 125 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 RNU6-925P-201ENST00000384629 104 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SNORA77-201ENST00000408716 125 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 BX323845.1-201ENST00000432417 179 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AL450023.3-201ENST00000440592 271 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 HMGB3P6-201ENST00000444896 598 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 AL034418.1-201ENST00000448675 860 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AC092647.2-201ENST00000452998 253 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 snoU13.3-201ENST00000459441 104 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC022832.1-201ENST00000530718 645 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 LSM3P2-201ENST00000551246 273 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGB1P09429 MIR3912-201ENST00000577566 105 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC091946.2-201ENST00000606105 291 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AL391834.2-201ENST00000609982 546 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms