Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.98□□□□□ -1.93
CXCL1P09341 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC008802.1-201ENST00000519121 791 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 SUMO2P20-201ENST00000520803 283 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC006518.1-201ENST00000541449 943 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC022655.2-201ENST00000577280 318 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 AC009948.4-201ENST00000604692 675 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AL445222.1-201ENST00000607259 628 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC133644.2-201ENST00000608142 540 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL1P09341 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC019131.2-201ENST00000609071 870 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 MIR6780A-201ENST00000615089 68 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AL713922.2-201ENST00000619384 716 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC002044.3-201ENST00000623314 541 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AP003072.5-201ENST00000623872 773 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 ATE1-AS1-202ENST00000636460 506 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 MTCO1P11-201ENST00000429111 1528 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL1P09341 AC109780.1-201ENST00000451768 1344 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.97□□□□□ -1.93
CXCL1P09341 AL356317.1-201ENST00000396110 1436 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 MIR30E-201ENST00000362104 92 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL1P09341 MT-TP-201ENST00000387461 68 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CXCL1P09341 PTMAP5-201ENST00000393073 333 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL1P09341 RPS3AP23-201ENST00000401762 784 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RNU4-25P-201ENST00000410569 230 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RN7SKP182-201ENST00000410772 298 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RNU6-55P-201ENST00000411092 107 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RNU6-954P-201ENST00000411355 107 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC017079.2-201ENST00000416102 485 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL1P09341 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.97□□□□□ -1.93
CXCL1P09341 AL158071.1-201ENST00000430315 461 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AL358472.1-201ENST00000431295 329 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 USP9YP31-201ENST00000431405 881 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.97□□□□□ -1.93
CXCL1P09341 RPL12P26-201ENST00000452430 487 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC009963.2-201ENST00000453431 138 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RPS27P29-201ENST00000463110 252 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 SEPT7P6-201ENST00000469999 1143 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC087385.1-201ENST00000475062 312 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RN7SL481P-201ENST00000477764 299 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC005912.1-201ENST00000495392 255 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 FCF1P3-201ENST00000496394 590 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL1P09341 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.97□□□□□ -1.93
CXCL1P09341 RNA5SP519-201ENST00000516480 119 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RNA5SP309-201ENST00000516670 106 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 RN7SKP289-201ENST00000517244 295 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 AL161713.1-201ENST00000555538 145 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL1P09341 MIR4270-201ENST00000581799 70 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC008507.1-201ENST00000587506 734 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC012531.5-201ENST00000611375 151 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 AC023043.4-201ENST00000612081 449 ntBASIC2.97□□□□□ -1.93
CXCL1P09341 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CXCL1P09341 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL1P09341 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL1P09341 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL1P09341 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL1P09341 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.97□□□□□ -1.93
CXCL1P09341 AC024560.2-201ENST00000507981 1497 ntBASIC2.96□□□□□ -1.93
CXCL1P09341 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CXCL1P09341 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CXCL1P09341 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CXCL1P09341 CIR1P2-201ENST00000514821 1342 ntBASIC2.96□□□□□ -1.93
CXCL1P09341 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CXCL1P09341 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC015813.6-201ENST00000624409 5808 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CXCL1P09341 MIR92A2-201ENST00000385299 75 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 RPL23AP59-201ENST00000399415 461 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 HMGB3P19-201ENST00000403971 560 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 RPL31P52-201ENST00000407532 367 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AL035696.2-201ENST00000407941 709 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 RNA5SP293-201ENST00000410527 113 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 RPS26P13-201ENST00000419030 330 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC006011.1-201ENST00000442758 349 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms