Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC072039.2-201ENST00000608883 439 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC245297.2-201ENST00000610119 565 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 Z95327.3-201ENST00000610385 572 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 OR8G7P-201ENST00000616658 848 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AL121890.3-201ENST00000618494 516 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 Z69908.1-201ENST00000622603 247 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 VN2R3P-201ENST00000422626 1412 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 MTCO1P18-201ENST00000455518 1419 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AL034370.1-201ENST00000397254 1590 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC107068.1-201ENST00000563286 4218 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC111188.2-201ENST00000529697 1387 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC092104.1-201ENST00000497346 1441 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 RNA5SP27-201ENST00000363839 119 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 NPM1P38-201ENST00000403835 865 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 GSTA8P-201ENST00000404253 637 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL445213.1-201ENST00000412589 747 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 LINC01347-201ENST00000417964 355 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 RPL7P53-201ENST00000421245 739 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 PRELID3BP10-201ENST00000431957 584 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC091390.1-201ENST00000433904 331 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 MTCYBP42-201ENST00000444653 1130 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 RPL10P17-201ENST00000453852 316 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 OR5H4P-201ENST00000510851 923 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC007016.1-201ENST00000512110 244 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC093755.1-201ENST00000512950 1023 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 RNU6-232P-201ENST00000517144 64 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 MTCYBP20-201ENST00000524239 1129 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 DEFB130C-202ENST00000530001 230 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC084783.1-201ENST00000565846 910 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC008782.1-201ENST00000603386 430 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC005191.1-201ENST00000603950 358 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AL163642.2-201ENST00000604722 1019 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC104073.3-201ENST00000610942 955 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC083809.1-201ENST00000615051 472 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 AP005019.3-201ENST00000620418 560 ntBASIC5.52□□□□□ -1.53
HLA-DOAP06340 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HLA-DOAP06340 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DOAP06340 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AP000580.1-201ENST00000404439 358 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 HMGB3P18-201ENST00000406327 590 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 HMGB3P31-201ENST00000413333 595 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 OR4K6P-201ENST00000416478 897 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 E2F6P2-201ENST00000420708 748 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms